Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:4376034-5216066

Filter by:
29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi21335 9 4376105 to 4376722 617 CpG island CpG island 21335
Tssr83629 9 4376533 to 4376600 67 + TSS region transcription start site region 83629
Msantd4 9 4376562 to 4386870 10308 + protein coding gene Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
Gria4 9 4417896 to 4796234 378338 - protein coding gene glutamate receptor, ionotropic, AMPA4 (alpha 4)
Gm23811 9 4455940 to 4456023 83 - miRNA gene predicted gene, 23811
Tssr88037 9 4472210 to 4472228 18 - TSS region transcription start site region 88037
Tssr88038 9 4507961 to 4507965 4 - TSS region transcription start site region 88038
Gm46101 9 4513388 to 4532927 19539 + lncRNA gene predicted gene, 46101
Tssr88039 9 4635267 to 4635271 4 - TSS region transcription start site region 88039
Tssr88040 9 4765243 to 4765247 4 - TSS region transcription start site region 88040
Cpgi21336 9 4795545 to 4796457 912 CpG island CpG island 21336
Tssr88041 9 4795561 to 4795644 83 - TSS region transcription start site region 88041
Tssr88042 9 4795914 to 4795928 14 - TSS region transcription start site region 88042
Tssr88043 9 4795951 to 4795964 13 - TSS region transcription start site region 88043
Tssr88044 9 4795969 to 4795987 18 - TSS region transcription start site region 88044
Tssr88045 9 4796022 to 4796033 11 - TSS region transcription start site region 88045
Tssr88046 9 4796034 to 4796066 32 - TSS region transcription start site region 88046
Tssr88047 9 4796070 to 4796081 11 - TSS region transcription start site region 88047
Tssr88048 9 4796141 to 4796159 18 - TSS region transcription start site region 88048
Tssr88049 9 4796160 to 4796195 35 - TSS region transcription start site region 88049
Tssr88050 9 4796196 to 4796216 20 - TSS region transcription start site region 88050
Tssr88051 9 4796218 to 4796267 49 - TSS region transcription start site region 88051
Gm46100 9 4796337 to 4800157 3820 + lncRNA gene predicted gene, 46100
Cpgi21337 9 4977605 to 4977809 204 CpG island CpG island 21337
Gm7390 9 4977959 to 4979174 1215 + pseudogene predicted gene 7390
Gm24896 9 5111399 to 5111533 134 + snoRNA gene predicted gene, 24896
Gm40508 9 5127223 to 5155287 28064 + lncRNA gene predicted gene, 40508
Gm31429 9 5157038 to 5166906 9868 + lncRNA gene predicted gene, 31429
Gm31492 9 5159386 to 5171522 12136 - lncRNA gene predicted gene, 31492