Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:43120398-43291244

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pou2f3 9 43123927 to 43205755 81828 - protein coding gene POU domain, class 2, transcription factor 3
Tssr2839 9 43142422 to 43142424 2 + TSS region transcription start site region 2839
Tssr89085 9 43171428 to 43171431 3 - TSS region transcription start site region 89085
Tssr89086 9 43200227 to 43200236 9 - TSS region transcription start site region 89086
Tssr89087 9 43200254 to 43200264 10 - TSS region transcription start site region 89087
Cpgi21626 9 43205398 to 43206244 846 CpG island CpG island 21626
Tssr89088 9 43205834 to 43205885 51 - TSS region transcription start site region 89088
Rpl26-ps6 9 43217122 to 43217555 433 + pseudogene ribosomal protein L26, pseudogene 6
Oaf 9 43221278 to 43239816 18538 - protein coding gene out at first homolog
Tssr89089 9 43225084 to 43225108 24 - TSS region transcription start site region 89089
Cpgi21627 9 43238951 to 43240178 1227 CpG island CpG island 21627
Tssr89090 9 43239795 to 43239810 15 - TSS region transcription start site region 89090
Tssr89091 9 43239817 to 43239842 25 - TSS region transcription start site region 89091
Tssr89092 9 43239883 to 43239892 9 - TSS region transcription start site region 89092
Tssr89093 9 43239946 to 43239955 9 - TSS region transcription start site region 89093
Tssr89094 9 43240376 to 43240391 15 - TSS region transcription start site region 89094
D630033O11Rik 9 43243599 to 43280076 36477 + lincRNA gene RIKEN cDNA D630033O11 gene
Tssr84550 9 43257403 to 43257411 8 + TSS region transcription start site region 84550
Tssr84551 9 43265409 to 43265418 9 + TSS region transcription start site region 84551
Cpgi21628 9 43270542 to 43271094 552 CpG island CpG island 21628
Cpgi21629 9 43286930 to 43287169 239 CpG island CpG island 21629