Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:41595332-41930145

Filter by:
23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Obq5 9 28592037 to 41888030 13295993 QTL obesity QTL 5
3110039I08Rik 9 41376526 to 41615185 238659 + lncRNA gene RIKEN cDNA 3110039I08 gene
Gm49317 9 41474855 to 41655483 180628 + lincRNA gene predicted gene, 49317
Tssr84535 9 41600132 to 41600150 18 + TSS region transcription start site region 84535
Gm48737 9 41618992 to 41621303 2311 + unclassified gene predicted gene, 48737
Gm8707 9 41654285 to 41655474 1189 + pseudogene predicted gene 8707
Gm48784 9 41659164 to 41675054 15890 - lincRNA gene predicted gene, 48784
Gm35835 9 41680147 to 41737398 57251 - lincRNA gene predicted gene, 35835
Tssr88998 9 41687837 to 41687845 8 - TSS region transcription start site region 88998
Gm46143 9 41760332 to 41765145 4813 + lncRNA gene predicted gene, 46143
6720432D03Rik 9 41803159 to 41805683 2524 - lncRNA gene RIKEN cDNA 6720432D03 gene
Gm35940 9 41804553 to 41834517 29964 + lncRNA gene predicted gene, 35940
Gm36032 9 41852138 to 41876283 24145 - lncRNA gene predicted gene, 36032
Tssr2833 9 41876197 to 41876205 8 - TSS region transcription start site region 2833
Tssr88999 9 41876213 to 41876218 5 - TSS region transcription start site region 88999
Gm48814 9 41876319 to 41879401 3082 + bidirectional promoter lncRNA gene predicted gene, 48814
Tssr84536 9 41885232 to 41885237 5 + TSS region transcription start site region 84536
Gm40513 9 41886627 to 41890549 3922 - lincRNA gene predicted gene, 40513
D9Mit328 9 41887849 to 41888030 181 DNA segment DNA Segment, Chr 9 Massachusetts Institute of Technology 328
Cpgi21613 9 41890287 to 41890870 583 CpG island CpG island 21613
Gm36170 9 41890583 to 41892399 1816 + lncRNA gene predicted gene, 36170
Gm40514 9 41906023 to 41910606 4583 - protein coding gene predicted gene, 40514
Gm36227 9 41911949 to 41919313 7364 - lncRNA gene predicted gene, 36227