Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:41540132-41660150

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
3110039I08Rik 9 41376526 to 41615185 238659 + lncRNA gene RIKEN cDNA 3110039I08 gene
Gm49317 9 41474855 to 41655483 180628 + lincRNA gene predicted gene, 49317
Gm48740 9 41551506 to 41559259 7753 - lincRNA gene predicted gene, 48740
D9Mit139.1 9 41554158 to 41554282 124 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 139.1
D9Mit139 9 41554260 to 41554397 137 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 139
Tssr88995 9 41579512 to 41579523 11 - TSS region transcription start site region 88995
Tssr88996 9 41579546 to 41579563 17 - TSS region transcription start site region 88996
Tssr84512 9 41579660 to 41579669 9 + TSS region transcription start site region 84512
Tssr84513 9 41579688 to 41579717 29 + TSS region transcription start site region 84513
Tssr84514 9 41579850 to 41579892 42 + TSS region transcription start site region 84514
Tssr84515 9 41579935 to 41579967 32 + TSS region transcription start site region 84515
Tssr84516 9 41579970 to 41579991 21 + TSS region transcription start site region 84516
Tssr84517 9 41580003 to 41580017 14 + TSS region transcription start site region 84517
Tssr84518 9 41580703 to 41580717 14 + TSS region transcription start site region 84518
Tssr84519 9 41580751 to 41580752 1 + TSS region transcription start site region 84519
Tssr88997 9 41580786 to 41580808 22 - TSS region transcription start site region 88997
Tssr84520 9 41580903 to 41580922 19 + TSS region transcription start site region 84520
Tssr84521 9 41580944 to 41580967 23 + TSS region transcription start site region 84521
Tssr84522 9 41580968 to 41581004 36 + TSS region transcription start site region 84522
Tssr84523 9 41581066 to 41581100 34 + TSS region transcription start site region 84523
Tssr84524 9 41581247 to 41581260 13 + TSS region transcription start site region 84524
Tssr84525 9 41581300 to 41581316 16 + TSS region transcription start site region 84525
Tssr84526 9 41581331 to 41581351 20 + TSS region transcription start site region 84526
Gm28119 9 41581908 to 41582283 375 + sense intronic lncRNA gene predicted gene 28119
Mir125b-1 9 41581926 to 41582002 76 + miRNA gene microRNA 125b-1
Tssr84527 9 41582000 to 41582004 4 + TSS region transcription start site region 84527
Tssr84528 9 41583024 to 41583042 18 + TSS region transcription start site region 84528
Tssr84529 9 41584411 to 41584415 4 + TSS region transcription start site region 84529
Tssr84530 9 41585391 to 41585398 7 + TSS region transcription start site region 84530
Tssr84531 9 41586485 to 41586512 27 + TSS region transcription start site region 84531
Tssr84532 9 41587431 to 41587437 6 + TSS region transcription start site region 84532
Tssr84533 9 41588374 to 41588382 8 + TSS region transcription start site region 84533
Tssr84534 9 41591741 to 41591764 23 + TSS region transcription start site region 84534
Tssr84535 9 41600132 to 41600150 18 + TSS region transcription start site region 84535
Gm48737 9 41618992 to 41621303 2311 + unclassified gene predicted gene, 48737
Gm8707 9 41654285 to 41655474 1189 + pseudogene predicted gene 8707
Gm48784 9 41659164 to 41675054 15890 - lincRNA gene predicted gene, 48784