Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Obq5 | 9 | 13295993 | QTL | obesity QTL 5 | ||
Phdlc1 | 9 | 8660247 | QTL | plasma HDL cholesterol 1 | ||
3110039I08Rik | 9 | 238659 | + | lncRNA gene | RIKEN cDNA 3110039I08 gene | |
Gm48742 | 9 | 126713 | - | lincRNA gene | predicted gene, 48742 | |
Gm49317 | 9 | 180628 | + | lincRNA gene | predicted gene, 49317 | |
D9Mit227 | 9 | 82 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 227 | ||
Lfibq8 | 9 | 3941579 | QTL | liver fibrosis QTL 8 | ||
Gm48736 | 9 | 255 | - | pseudogene | predicted gene, 48736 | |
Tssr84509 | 9 | 31 | + | TSS region | transcription start site region 84509 | |
Mir100 | 9 | 79 | + | miRNA gene | microRNA 100 | |
Tssr84510 | 9 | 7 | + | TSS region | transcription start site region 84510 | |
Tssr84511 | 9 | 23 | + | TSS region | transcription start site region 84511 | |
Mirlet7a-2 | 9 | 95 | + | miRNA gene | microRNA let7a-2 | |
Gm48740 | 9 | 7753 | - | lincRNA gene | predicted gene, 48740 | |
D9Mit139.1 | 9 | 124 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 139.1 | ||
D9Mit139 | 9 | 137 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 139 | ||
Tssr88995 | 9 | 11 | - | TSS region | transcription start site region 88995 | |
Tssr88996 | 9 | 17 | - | TSS region | transcription start site region 88996 | |
Tssr84512 | 9 | 9 | + | TSS region | transcription start site region 84512 | |
Tssr84513 | 9 | 29 | + | TSS region | transcription start site region 84513 | |
Tssr84514 | 9 | 42 | + | TSS region | transcription start site region 84514 | |
Tssr84515 | 9 | 32 | + | TSS region | transcription start site region 84515 | |
Tssr84516 | 9 | 21 | + | TSS region | transcription start site region 84516 | |
Tssr84517 | 9 | 14 | + | TSS region | transcription start site region 84517 | |
Tssr84518 | 9 | 14 | + | TSS region | transcription start site region 84518 | |
Tssr84519 | 9 | 1 | + | TSS region | transcription start site region 84519 | |
Tssr88997 | 9 | 22 | - | TSS region | transcription start site region 88997 | |
Tssr84520 | 9 | 19 | + | TSS region | transcription start site region 84520 | |
Tssr84521 | 9 | 23 | + | TSS region | transcription start site region 84521 | |
Tssr84522 | 9 | 36 | + | TSS region | transcription start site region 84522 | |
Tssr84523 | 9 | 34 | + | TSS region | transcription start site region 84523 | |
Tssr84524 | 9 | 13 | + | TSS region | transcription start site region 84524 | |
Tssr84525 | 9 | 16 | + | TSS region | transcription start site region 84525 | |
Tssr84526 | 9 | 20 | + | TSS region | transcription start site region 84526 | |
Gm28119 | 9 | 375 | + | sense intronic lncRNA gene | predicted gene 28119 | |
Mir125b-1 | 9 | 76 | + | miRNA gene | microRNA 125b-1 | |
Tssr84527 | 9 | 4 | + | TSS region | transcription start site region 84527 | |
Tssr84528 | 9 | 18 | + | TSS region | transcription start site region 84528 | |
Tssr84529 | 9 | 4 | + | TSS region | transcription start site region 84529 | |
Tssr84530 | 9 | 7 | + | TSS region | transcription start site region 84530 | |
Tssr84531 | 9 | 27 | + | TSS region | transcription start site region 84531 | |
Tssr84532 | 9 | 6 | + | TSS region | transcription start site region 84532 | |
Tssr84533 | 9 | 8 | + | TSS region | transcription start site region 84533 | |
Tssr84534 | 9 | 23 | + | TSS region | transcription start site region 84534 | |
Tssr84535 | 9 | 18 | + | TSS region | transcription start site region 84535 | |
Gm48737 | 9 | 2311 | + | unclassified gene | predicted gene, 48737 | |
Gm8707 | 9 | 1189 | + | pseudogene | predicted gene 8707 | |
Gm48784 | 9 | 15890 | - | lincRNA gene | predicted gene, 48784 | |
Gm35835 | 9 | 57251 | - | lincRNA gene | predicted gene, 35835 | |
Tssr88998 | 9 | 8 | - | TSS region | transcription start site region 88998 | |
Gm46143 | 9 | 4813 | + | lncRNA gene | predicted gene, 46143 | |
6720432D03Rik | 9 | 2524 | - | lncRNA gene | RIKEN cDNA 6720432D03 gene | |
Gm35940 | 9 | 29964 | + | lncRNA gene | predicted gene, 35940 | |
Gm36032 | 9 | 24145 | - | lncRNA gene | predicted gene, 36032 | |
Tssr2833 | 9 | 8 | - | TSS region | transcription start site region 2833 | |
Tssr88999 | 9 | 5 | - | TSS region | transcription start site region 88999 | |
Gm48814 | 9 | 3082 | + | bidirectional promoter lncRNA gene | predicted gene, 48814 | |
Tssr84536 | 9 | 5 | + | TSS region | transcription start site region 84536 | |
Gm40513 | 9 | 3922 | - | lincRNA gene | predicted gene, 40513 | |
D9Mit328 | 9 | 181 | DNA segment | DNA Segment, Chr 9 Massachusetts Institute of Technology 328 | ||
Cpgi21613 | 9 | 583 | CpG island | CpG island 21613 | ||
Gm36170 | 9 | 1816 | + | lncRNA gene | predicted gene, 36170 | |
Gm40514 | 9 | 4583 | - | protein coding gene | predicted gene, 40514 | |
Gm36227 | 9 | 7364 | - | lncRNA gene | predicted gene, 36227 | |
Tssr89000 | 9 | 2 | - | TSS region | transcription start site region 89000 | |
Cpgi21614 | 9 | 191 | CpG island | CpG island 21614 | ||
Cpgi21615 | 9 | 842 | CpG island | CpG island 21615 | ||
Sorl1 | 9 | 159571 | - | protein coding gene | sortilin-related receptor, LDLR class A repeats-containing | |
Tssr89001 | 9 | 14 | - | TSS region | transcription start site region 89001 | |
Tssr89002 | 9 | 10 | - | TSS region | transcription start site region 89002 | |
Tssr89003 | 9 | 30 | - | TSS region | transcription start site region 89003 | |
D9Bwg1411e | 9 | 268 | DNA segment | DNA segment, Chr 9, Brigham & Women's Genetics 1411 expressed | ||
Tssr89004 | 9 | 11 | - | TSS region | transcription start site region 89004 | |
Gm16214 | 9 | 11498 | + | antisense lncRNA gene | predicted gene 16214 | |
Tssr89005 | 9 | 16 | - | TSS region | transcription start site region 89005 | |
Tssr89006 | 9 | 40 | - | TSS region | transcription start site region 89006 | |
Tssr84537 | 9 | 35 | + | TSS region | transcription start site region 84537 | |
Tssr84538 | 9 | 27 | + | TSS region | transcription start site region 84538 | |
Tssr89007 | 9 | 3 | - | TSS region | transcription start site region 89007 | |
Tssr89008 | 9 | 28 | - | TSS region | transcription start site region 89008 | |
D9Mit45 | 9 | 189 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 45 | ||
Tssr89009 | 9 | 43 | - | TSS region | transcription start site region 89009 | |
Tssr2834 | 9 | 40 | + | TSS region | transcription start site region 2834 | |
Tssr2835 | 9 | 38 | - | TSS region | transcription start site region 2835 | |
Tssr84539 | 9 | 10 | + | TSS region | transcription start site region 84539 | |
Cpgi21616 | 9 | 1255 | CpG island | CpG island 21616 | ||
Tssr89010 | 9 | 31 | - | TSS region | transcription start site region 89010 | |
Tssr89011 | 9 | 11 | - | TSS region | transcription start site region 89011 | |
Tssr89012 | 9 | 7 | - | TSS region | transcription start site region 89012 | |
Tssr89013 | 9 | 57 | - | TSS region | transcription start site region 89013 | |
Tssr89014 | 9 | 11 | - | TSS region | transcription start site region 89014 | |
Tssr84540 | 9 | 5 | + | TSS region | transcription start site region 84540 | |
Tssr84541 | 9 | 16 | + | TSS region | transcription start site region 84541 | |
Gm39321 | 9 | 3302 | + | lincRNA gene | predicted gene, 39321 | |
Tssr84542 | 9 | 11 | + | TSS region | transcription start site region 84542 | |
Tssr84543 | 9 | 15 | + | TSS region | transcription start site region 84543 | |
Tssr84544 | 9 | 11 | + | TSS region | transcription start site region 84544 | |
4930546K05Rik | 9 | 26993 | - | lincRNA gene | RIKEN cDNA 4930546K05 gene | |
Gm36390 | 9 | 3342 | + | lncRNA gene | predicted gene, 36390 | |
Gm40515 | 9 | 12960 | - | lncRNA gene | predicted gene, 40515 | |
Sc5d | 9 | 12661 | - | protein coding gene | sterol-C5-desaturase | |
Tssr89015 | 9 | 15 | - | TSS region | transcription start site region 89015 | |
Tssr89016 | 9 | 12 | - | TSS region | transcription start site region 89016 | |
Tssr89017 | 9 | 5 | - | TSS region | transcription start site region 89017 | |
Cpgi21617 | 9 | 989 | CpG island | CpG island 21617 | ||
Tssr89018 | 9 | 15 | - | TSS region | transcription start site region 89018 | |
Tssr89019 | 9 | 56 | - | TSS region | transcription start site region 89019 | |
Tssr84545 | 9 | 8 | + | TSS region | transcription start site region 84545 | |
Gm36435 | 9 | 5055 | - | lincRNA gene | predicted gene, 36435 | |
Tssr2836 | 9 | 9 | + | TSS region | transcription start site region 2836 | |
Tssr84546 | 9 | 9 | + | TSS region | transcription start site region 84546 | |
Gm26272 | 9 | 131 | - | snoRNA gene | predicted gene, 26272 | |
D9Mit313 | 9 | 269 | DNA segment | DNA Segment, Chr 9, Massachusetts Institute of Technology-313 | ||
Cpgi21618 | 9 | 330 | CpG island | CpG island 21618 | ||
Tecta | 9 | 70310 | - | protein coding gene | tectorin alpha | |
Tssr89020 | 9 | 22 | - | TSS region | transcription start site region 89020 | |
Tssr89021 | 9 | 17 | - | TSS region | transcription start site region 89021 | |
Tssr89022 | 9 | 1 | - | TSS region | transcription start site region 89022 | |
Tssr89023 | 9 | 10 | - | TSS region | transcription start site region 89023 | |
Cpgi21619 | 9 | 482 | CpG island | CpG island 21619 | ||
Gm47629 | 9 | 5024 | + | antisense lncRNA gene | predicted gene, 47629 | |
Tssr89024 | 9 | 1 | - | TSS region | transcription start site region 89024 | |
Tssr89025 | 9 | 9 | - | TSS region | transcription start site region 89025 | |
Tssr89026 | 9 | 29 | - | TSS region | transcription start site region 89026 | |
Tssr89027 | 9 | 9 | - | TSS region | transcription start site region 89027 | |
Tssr89028 | 9 | 9 | - | TSS region | transcription start site region 89028 | |
Tssr89029 | 9 | 11 | - | TSS region | transcription start site region 89029 | |
Tssr89030 | 9 | 7 | - | TSS region | transcription start site region 89030 | |
Tssr2837 | 9 | 8 | - | TSS region | transcription start site region 2837 | |
Tssr89031 | 9 | 8 | - | TSS region | transcription start site region 89031 | |
Tssr89032 | 9 | 12 | - | TSS region | transcription start site region 89032 | |
Tssr89033 | 9 | 13 | - | TSS region | transcription start site region 89033 | |
Tssr89034 | 9 | 7 | - | TSS region | transcription start site region 89034 | |
Tssr89035 | 9 | 9 | - | TSS region | transcription start site region 89035 | |
Tssr89036 | 9 | 24 | - | TSS region | transcription start site region 89036 | |
Tssr89037 | 9 | 73 | - | TSS region | transcription start site region 89037 | |
Tssr89038 | 9 | 13 | - | TSS region | transcription start site region 89038 | |
Tssr89039 | 9 | 12 | - | TSS region | transcription start site region 89039 | |
Tssr89040 | 9 | 11 | - | TSS region | transcription start site region 89040 | |
Tssr89041 | 9 | 20 | - | TSS region | transcription start site region 89041 | |
Tssr89042 | 9 | 7 | - | TSS region | transcription start site region 89042 | |
Tssr89043 | 9 | 15 | - | TSS region | transcription start site region 89043 | |
Tssr89044 | 9 | 15 | - | TSS region | transcription start site region 89044 | |
Tssr89045 | 9 | 15 | - | TSS region | transcription start site region 89045 | |
Tssr89046 | 9 | 11 | - | TSS region | transcription start site region 89046 | |
Tssr89047 | 9 | 22 | - | TSS region | transcription start site region 89047 | |
Tssr89048 | 9 | 34 | - | TSS region | transcription start site region 89048 | |
Tssr89049 | 9 | 21 | - | TSS region | transcription start site region 89049 | |
Tbcel | 9 | 59960 | - | protein coding gene | tubulin folding cofactor E-like | |
Tssr89050 | 9 | 10 | - | TSS region | transcription start site region 89050 | |
Tssr89051 | 9 | 16 | - | TSS region | transcription start site region 89051 | |
Tssr89052 | 9 | 11 | - | TSS region | transcription start site region 89052 | |
Tssr89053 | 9 | 37 | - | TSS region | transcription start site region 89053 | |
Gm44311 | 9 | 68 | + | miRNA gene | predicted gene, 44311 | |
Tssr89054 | 9 | 5 | - | TSS region | transcription start site region 89054 | |
Tssr89055 | 9 | 12 | - | TSS region | transcription start site region 89055 | |
Tssr89056 | 9 | 11 | - | TSS region | transcription start site region 89056 | |
Tssr89057 | 9 | 15 | - | TSS region | transcription start site region 89057 | |
Tssr89058 | 9 | 22 | - | TSS region | transcription start site region 89058 | |
Tssr89059 | 9 | 20 | - | TSS region | transcription start site region 89059 | |
Tssr84547 | 9 | 38 | + | TSS region | transcription start site region 84547 | |
Cpgi21620 | 9 | 574 | CpG island | CpG island 21620 | ||
Tssr89060 | 9 | 65 | - | TSS region | transcription start site region 89060 | |
Gm16322 | 9 | 31107 | + | antisense lncRNA gene | predicted gene 16322 | |
Grik4 | 9 | 424742 | - | protein coding gene | glutamate receptor, ionotropic, kainate 4 | |
Cpgi21621 | 9 | 689 | CpG island | CpG island 21621 | ||
Gm24420 | 9 | 58 | - | unclassified non-coding RNA gene | predicted gene, 24420 | |
Tssr84548 | 9 | 5 | + | TSS region | transcription start site region 84548 | |
9530085L02Rik | 9 | 4209 | unclassified non-coding RNA gene | RIKEN cDNA 9530085L02 gene | ||
Tssr84549 | 9 | 43 | + | TSS region | transcription start site region 84549 | |
Gm36590 | 9 | 10174 | + | lncRNA gene | predicted gene, 36590 | |
D9Mit254 | 9 | 96 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 254 | ||
Sluc39c | 9 | 96 | QTL | susceptibility to lung cancer 39c | ||
Sluc39a | 9 | 96 | QTL | susceptibility to lung cancer 39a | ||
Sluc39b | 9 | 96 | QTL | susceptibility to lung cancer 39b | ||
Sluc39d | 9 | 96 | QTL | susceptibility to lung cancer 39d | ||
Tssr89061 | 9 | 1 | - | TSS region | transcription start site region 89061 | |
Tssr2838 | 9 | 44 | - | TSS region | transcription start site region 2838 | |
Adip20a | 9 | 1363135 | QTL | adiposity 20a | ||
D9Mit140 | 9 | 134 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 140 | ||
Gm27509 | 9 | 78 | - | miRNA gene | predicted gene, 27509 | |
Cpgi21622 | 9 | 971 | CpG island | CpG island 21622 | ||
Cpgi21623 | 9 | 1697 | CpG island | CpG island 21623 | ||
Tssr89062 | 9 | 31 | - | TSS region | transcription start site region 89062 | |
Gm47931 | 9 | 642 | + | lincRNA gene | predicted gene, 47931 | |
Gm36648 | 9 | 1872 | + | lncRNA gene | predicted gene, 36648 | |
Arhgef12 | 9 | 141876 | - | protein coding gene | Rho guanine nucleotide exchange factor (GEF) 12 | |
Gm5831 | 9 | 1208 | + | pseudogene | predicted gene 5831 | |
Tssr89063 | 9 | 15 | - | TSS region | transcription start site region 89063 | |
Tssr89064 | 9 | 5 | - | TSS region | transcription start site region 89064 | |
Tssr89065 | 9 | 5 | - | TSS region | transcription start site region 89065 | |
Tssr89066 | 9 | 11 | - | TSS region | transcription start site region 89066 | |
Tssr89067 | 9 | 5 | - | TSS region | transcription start site region 89067 |