Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:40801658-40942132

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi21603 9 40800433 to 40801891 1458 CpG island CpG island 21603
Hspa8 9 40801273 to 40805199 3926 + protein coding gene heat shock protein 8
Tssr84482 9 40801905 to 40801913 8 + TSS region transcription start site region 84482
Tssr84483 9 40802366 to 40802369 3 + TSS region transcription start site region 84483
Tssr84484 9 40802625 to 40802656 31 + TSS region transcription start site region 84484
Snord14c 9 40803583 to 40803668 85 + snoRNA gene small nucleolar RNA, C/D box 14C
Snord14d 9 40803995 to 40804080 85 + snoRNA gene small nucleolar RNA, C/D box 14D
Tssr84485 9 40804224 to 40804235 11 + TSS region transcription start site region 84485
Tssr84486 9 40804739 to 40804751 12 + TSS region transcription start site region 84486
Snord14e 9 40804748 to 40804837 89 + snoRNA gene small nucleolar RNA, C/D box 14E
Tssr84487 9 40806638 to 40806642 4 + TSS region transcription start site region 84487
Tssr84488 9 40809251 to 40809255 4 + TSS region transcription start site region 84488
Gm48565 9 40820969 to 40822673 1704 + unclassified gene predicted gene, 48565
Cpgi21604 9 40871658 to 40872132 474 CpG island CpG island 21604
Tssr84489 9 40873981 to 40873998 17 + TSS region transcription start site region 84489
Bsx 9 40874127 to 40878962 4835 + protein coding gene brain specific homeobox
Cpgi21605 9 40875585 to 40875800 215 CpG island CpG island 21605
Cpgi21606 9 40876162 to 40876599 437 CpG island CpG island 21606
Cpgi21607 9 40877509 to 40878857 1348 CpG island CpG island 21607
Jhy 9 40894849 to 40964118 69269 - protein coding gene junctional cadherin complex regulator
Gm18586 9 40929909 to 40930426 517 - pseudogene predicted gene, 18586