Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:40783583-40823668

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clmp 9 40685962 to 40785319 99357 + protein coding gene CXADR-like membrane protein
Gm16096 9 40780742 to 40784181 3439 - unclassified non-coding RNA gene predicted gene 16096
Tssr88969 9 40783650 to 40783661 11 - TSS region transcription start site region 88969
Tssr88970 9 40784041 to 40784047 6 - TSS region transcription start site region 88970
Tssr88971 9 40784140 to 40784156 16 - TSS region transcription start site region 88971
Tssr84472 9 40784833 to 40784846 13 + TSS region transcription start site region 84472
Tssr84473 9 40784937 to 40784956 19 + TSS region transcription start site region 84473
Tssr84474 9 40784974 to 40784985 11 + TSS region transcription start site region 84474
Tssr84475 9 40784992 to 40785021 29 + TSS region transcription start site region 84475
Tssr84476 9 40785069 to 40785108 39 + TSS region transcription start site region 84476
Tssr84477 9 40794538 to 40794562 24 + TSS region transcription start site region 84477
Tssr84478 9 40798465 to 40798491 26 + TSS region transcription start site region 84478
Tssr84479 9 40799326 to 40799366 40 + TSS region transcription start site region 84479
Cpgi21602 9 40799988 to 40800156 168 CpG island CpG island 21602
Tssr84480 9 40800088 to 40800106 18 + TSS region transcription start site region 84480
Cpgi21603 9 40800433 to 40801891 1458 CpG island CpG island 21603
Tssr88972 9 40800762 to 40800786 24 - TSS region transcription start site region 88972
Tssr84481 9 40801266 to 40801284 18 + TSS region transcription start site region 84481
Hspa8 9 40801273 to 40805199 3926 + protein coding gene heat shock protein 8
Tssr84482 9 40801905 to 40801913 8 + TSS region transcription start site region 84482
Tssr84483 9 40802366 to 40802369 3 + TSS region transcription start site region 84483
Tssr84484 9 40802625 to 40802656 31 + TSS region transcription start site region 84484
Snord14c 9 40803583 to 40803668 85 + snoRNA gene small nucleolar RNA, C/D box 14C
Snord14d 9 40803995 to 40804080 85 + snoRNA gene small nucleolar RNA, C/D box 14D
Tssr84485 9 40804224 to 40804235 11 + TSS region transcription start site region 84485
Tssr84486 9 40804739 to 40804751 12 + TSS region transcription start site region 84486
Snord14e 9 40804748 to 40804837 89 + snoRNA gene small nucleolar RNA, C/D box 14E
Tssr84487 9 40806638 to 40806642 4 + TSS region transcription start site region 84487
Tssr84488 9 40809251 to 40809255 4 + TSS region transcription start site region 84488
Gm48565 9 40820969 to 40822673 1704 + unclassified gene predicted gene, 48565