Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:40481362-40581390

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gramd1b 9 40293233 to 40531383 238150 - protein coding gene GRAM domain containing 1B
Tssr84454 9 40487662 to 40487685 23 + TSS region transcription start site region 84454
Tssr88957 9 40487673 to 40487677 4 - TSS region transcription start site region 88957
Gm5055 9 40487720 to 40488300 580 + pseudogene predicted gene 5055
Tssr88958 9 40489677 to 40489686 9 - TSS region transcription start site region 88958
Tssr88959 9 40489727 to 40489738 11 - TSS region transcription start site region 88959
Tssr88960 9 40489749 to 40489760 11 - TSS region transcription start site region 88960
Tssr88961 9 40489761 to 40489765 4 - TSS region transcription start site region 88961
D9Mit206.1 9 40508166 to 40508292 126 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 206.1
D9Mit206 9 40508298 to 40508395 97 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 206
Ath29 9 40508298 to 74700643 34192345 QTL atherosclerosis 29
Tdmq1 9 40508298 to 51897370 11389072 QTL type 2 diabetes modifying QTL 1
Cpgi21595 9 40530980 to 40531674 694 CpG island CpG island 21595
Tssr88962 9 40531103 to 40531127 24 - TSS region transcription start site region 88962
Gm17540 9 40531155 to 40533620 2465 + lincRNA gene predicted gene, 17540
Tssr88963 9 40531291 to 40531306 15 - TSS region transcription start site region 88963
Tssr88964 9 40531316 to 40531334 18 - TSS region transcription start site region 88964
Tssr88965 9 40531362 to 40531390 28 - TSS region transcription start site region 88965
Tssr88966 9 40531461 to 40531473 12 - TSS region transcription start site region 88966
Gm35177 9 40547307 to 40560007 12700 + lincRNA gene predicted gene, 35177
Gm48277 9 40555086 to 40560929 5843 - lincRNA gene predicted gene, 48277
Tssr84455 9 40575333 to 40575378 45 + TSS region transcription start site region 84455