Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:40342984-40472995

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700110K17Rik 9 40333472 to 40343337 9865 + antisense lncRNA gene RIKEN cDNA 1700110K17 gene
Tssr88898 9 40345216 to 40345221 5 - TSS region transcription start site region 88898
Tssr88899 9 40345240 to 40345255 15 - TSS region transcription start site region 88899
Tssr88900 9 40346115 to 40346131 16 - TSS region transcription start site region 88900
Tssr88901 9 40346189 to 40346200 11 - TSS region transcription start site region 88901
Tssr88902 9 40346205 to 40346233 28 - TSS region transcription start site region 88902
Tssr88903 9 40346295 to 40346337 42 - TSS region transcription start site region 88903
Gm48114 9 40363217 to 40366902 3685 - unclassified gene predicted gene, 48114
Tssr88904 9 40376121 to 40376139 18 - TSS region transcription start site region 88904
Tssr88905 9 40376213 to 40376263 50 - TSS region transcription start site region 88905
Tssr88906 9 40376332 to 40376358 26 - TSS region transcription start site region 88906
Tssr88907 9 40376359 to 40376415 56 - TSS region transcription start site region 88907
Tssr88908 9 40376426 to 40376444 18 - TSS region transcription start site region 88908
Tssr88909 9 40376830 to 40376847 17 - TSS region transcription start site region 88909
Tssr88910 9 40390394 to 40390401 7 - TSS region transcription start site region 88910
Cpgi21593 9 40391506 to 40391770 264 CpG island CpG island 21593
Tssr88911 9 40392423 to 40392433 10 - TSS region transcription start site region 88911
Tssr88912 9 40392435 to 40392482 47 - TSS region transcription start site region 88912
Tssr88913 9 40403681 to 40403692 11 - TSS region transcription start site region 88913
Tssr88914 9 40407984 to 40407995 11 - TSS region transcription start site region 88914
Tssr88915 9 40408023 to 40408028 5 - TSS region transcription start site region 88915
Tssr88916 9 40408061 to 40408072 11 - TSS region transcription start site region 88916
Tssr2830 9 40408086 to 40408089 3 - TSS region transcription start site region 2830
Tssr88917 9 40411731 to 40411734 3 - TSS region transcription start site region 88917
Tssr88918 9 40414485 to 40414533 48 - TSS region transcription start site region 88918
Tssr88919 9 40423432 to 40423492 60 - TSS region transcription start site region 88919
Tssr88920 9 40423638 to 40423654 16 - TSS region transcription start site region 88920
Tssr88921 9 40425678 to 40425682 4 - TSS region transcription start site region 88921
Tssr88922 9 40430876 to 40430880 4 - TSS region transcription start site region 88922
Tssr88923 9 40430952 to 40430971 19 - TSS region transcription start site region 88923
Tssr88924 9 40435029 to 40435061 32 - TSS region transcription start site region 88924
Tssr88925 9 40435101 to 40435106 5 - TSS region transcription start site region 88925
Tssr88926 9 40435145 to 40435153 8 - TSS region transcription start site region 88926
Tssr88927 9 40435156 to 40435171 15 - TSS region transcription start site region 88927
Tssr88928 9 40435233 to 40435242 9 - TSS region transcription start site region 88928
Tssr88929 9 40437190 to 40437204 14 - TSS region transcription start site region 88929
Tssr88930 9 40437245 to 40437257 12 - TSS region transcription start site region 88930
Tssr88931 9 40437264 to 40437294 30 - TSS region transcription start site region 88931
Tssr88932 9 40449935 to 40449973 38 - TSS region transcription start site region 88932
Tssr88933 9 40450250 to 40450259 9 - TSS region transcription start site region 88933
Tssr84447 9 40450296 to 40450342 46 + TSS region transcription start site region 84447
Tssr84448 9 40450365 to 40450411 46 + TSS region transcription start site region 84448
Cpgi21594 9 40455152 to 40456367 1215 CpG island CpG island 21594
Tssr84449 9 40455293 to 40455321 28 + TSS region transcription start site region 84449
Tssr88934 9 40455342 to 40455384 42 - TSS region transcription start site region 88934
Tssr88935 9 40455418 to 40455435 17 - TSS region transcription start site region 88935
Tssr88936 9 40455443 to 40455456 13 - TSS region transcription start site region 88936
Tssr88937 9 40455506 to 40455520 14 - TSS region transcription start site region 88937
Tssr88938 9 40455774 to 40455777 3 - TSS region transcription start site region 88938
Tssr88939 9 40455781 to 40455812 31 - TSS region transcription start site region 88939
Tssr88940 9 40455837 to 40455844 7 - TSS region transcription start site region 88940
Tssr84450 9 40455891 to 40455910 19 + TSS region transcription start site region 84450
Tssr88941 9 40456119 to 40456133 14 - TSS region transcription start site region 88941
Tssr88942 9 40456137 to 40456148 11 - TSS region transcription start site region 88942
Tssr88943 9 40456152 to 40456176 24 - TSS region transcription start site region 88943
Tssr88944 9 40456195 to 40456224 29 - TSS region transcription start site region 88944
Tssr88945 9 40456230 to 40456241 11 - TSS region transcription start site region 88945
Tssr88946 9 40456312 to 40456337 25 - TSS region transcription start site region 88946
Tssr88947 9 40456340 to 40456366 26 - TSS region transcription start site region 88947
Tssr88948 9 40456387 to 40456396 9 - TSS region transcription start site region 88948
Tssr88949 9 40457472 to 40457485 13 - TSS region transcription start site region 88949
Tssr84451 9 40457655 to 40457658 3 + TSS region transcription start site region 84451
Tssr84452 9 40457683 to 40457713 30 + TSS region transcription start site region 84452
Tssr84453 9 40458424 to 40458429 5 + TSS region transcription start site region 84453
Tssr88950 9 40465584 to 40465595 11 - TSS region transcription start site region 88950
Tssr88951 9 40465634 to 40465664 30 - TSS region transcription start site region 88951
Tssr88952 9 40465683 to 40465699 16 - TSS region transcription start site region 88952
Tssr88953 9 40465713 to 40465734 21 - TSS region transcription start site region 88953
Tssr88954 9 40465741 to 40465764 23 - TSS region transcription start site region 88954
Tssr88955 9 40465802 to 40465811 9 - TSS region transcription start site region 88955
Tssr88956 9 40465818 to 40465825 7 - TSS region transcription start site region 88956
Tssr2831 9 40469763 to 40469769 6 + TSS region transcription start site region 2831