Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:40326830-40426847

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr84443 9 40327255 to 40327258 3 + TSS region transcription start site region 84443
Tssr88895 9 40333260 to 40333301 41 - TSS region transcription start site region 88895
Cpgi21592 9 40333420 to 40333677 257 CpG island CpG island 21592
Tssr84444 9 40333452 to 40333463 11 + TSS region transcription start site region 84444
Tssr84445 9 40333470 to 40333473 3 + TSS region transcription start site region 84445
1700110K17Rik 9 40333472 to 40343337 9865 + antisense lncRNA gene RIKEN cDNA 1700110K17 gene
Tssr88896 9 40339580 to 40339612 32 - TSS region transcription start site region 88896
Tssr88897 9 40341497 to 40341536 39 - TSS region transcription start site region 88897
Tssr84446 9 40341553 to 40341590 37 + TSS region transcription start site region 84446
Gm48129 9 40341618 to 40342103 485 - sense intronic lncRNA gene predicted gene, 48129
Gm48127 9 40342308 to 40342938 630 - sense intronic lncRNA gene predicted gene, 48127
Tssr88898 9 40345216 to 40345221 5 - TSS region transcription start site region 88898
Tssr88899 9 40345240 to 40345255 15 - TSS region transcription start site region 88899
Tssr88900 9 40346115 to 40346131 16 - TSS region transcription start site region 88900
Tssr88901 9 40346189 to 40346200 11 - TSS region transcription start site region 88901
Tssr88902 9 40346205 to 40346233 28 - TSS region transcription start site region 88902
Tssr88903 9 40346295 to 40346337 42 - TSS region transcription start site region 88903
Gm48114 9 40363217 to 40366902 3685 - unclassified gene predicted gene, 48114
Tssr88904 9 40376121 to 40376139 18 - TSS region transcription start site region 88904
Tssr88905 9 40376213 to 40376263 50 - TSS region transcription start site region 88905
Tssr88906 9 40376332 to 40376358 26 - TSS region transcription start site region 88906
Tssr88907 9 40376359 to 40376415 56 - TSS region transcription start site region 88907
Tssr88908 9 40376426 to 40376444 18 - TSS region transcription start site region 88908
Tssr88909 9 40376830 to 40376847 17 - TSS region transcription start site region 88909
Tssr88910 9 40390394 to 40390401 7 - TSS region transcription start site region 88910
Cpgi21593 9 40391506 to 40391770 264 CpG island CpG island 21593
Tssr88911 9 40392423 to 40392433 10 - TSS region transcription start site region 88911
Tssr88912 9 40392435 to 40392482 47 - TSS region transcription start site region 88912
Tssr88913 9 40403681 to 40403692 11 - TSS region transcription start site region 88913
Tssr88914 9 40407984 to 40407995 11 - TSS region transcription start site region 88914
Tssr88915 9 40408023 to 40408028 5 - TSS region transcription start site region 88915
Tssr88916 9 40408061 to 40408072 11 - TSS region transcription start site region 88916
Tssr2830 9 40408086 to 40408089 3 - TSS region transcription start site region 2830
Tssr88917 9 40411731 to 40411734 3 - TSS region transcription start site region 88917
Tssr88918 9 40414485 to 40414533 48 - TSS region transcription start site region 88918
Tssr88919 9 40423432 to 40423492 60 - TSS region transcription start site region 88919
Tssr88920 9 40423638 to 40423654 16 - TSS region transcription start site region 88920
Tssr88921 9 40425678 to 40425682 4 - TSS region transcription start site region 88921