Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:40239217-40321618

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr88878 9 40239872 to 40239885 13 - TSS region transcription start site region 88878
Tssr88879 9 40239897 to 40239921 24 - TSS region transcription start site region 88879
Cpgi21590 9 40241748 to 40241920 172 CpG island CpG island 21590
Cpgi21591 9 40269073 to 40269814 741 CpG island CpG island 21591
Tssr84432 9 40269202 to 40269265 63 + TSS region transcription start site region 84432
Scn3b 9 40269217 to 40291618 22401 + protein coding gene sodium channel, voltage-gated, type III, beta
Tssr84433 9 40269274 to 40269303 29 + TSS region transcription start site region 84433
Tssr84434 9 40269354 to 40269366 12 + TSS region transcription start site region 84434
Tssr84435 9 40269379 to 40269423 44 + TSS region transcription start site region 84435
Tssr84436 9 40269430 to 40269441 11 + TSS region transcription start site region 84436
Tssr84437 9 40269451 to 40269472 21 + TSS region transcription start site region 84437
Tssr84438 9 40269473 to 40269496 23 + TSS region transcription start site region 84438
Gm47266 9 40275903 to 40276532 629 - unclassified gene predicted gene, 47266
Tssr84439 9 40286091 to 40286095 4 + TSS region transcription start site region 84439
Gramd1b 9 40293233 to 40531383 238150 - protein coding gene GRAM domain containing 1B
Tssr88880 9 40295074 to 40295109 35 - TSS region transcription start site region 88880
D9Mit153.2 9 40300449 to 40300558 109 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 153.2
D9Mit153 9 40300517 to 40300626 109 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 153
Tssr88881 9 40306994 to 40307018 24 - TSS region transcription start site region 88881
Tssr88882 9 40320867 to 40320888 21 - TSS region transcription start site region 88882
Tssr88883 9 40320914 to 40320949 35 - TSS region transcription start site region 88883
Tssr88884 9 40320954 to 40320979 25 - TSS region transcription start site region 88884
Tssr88885 9 40321126 to 40321137 11 - TSS region transcription start site region 88885
Tssr88886 9 40321161 to 40321172 11 - TSS region transcription start site region 88886
Tssr88887 9 40321181 to 40321190 9 - TSS region transcription start site region 88887
Tssr88888 9 40321191 to 40321202 11 - TSS region transcription start site region 88888
Tssr88889 9 40321247 to 40321252 5 - TSS region transcription start site region 88889
Tssr88890 9 40321256 to 40321267 11 - TSS region transcription start site region 88890
Tssr88891 9 40321270 to 40321293 23 - TSS region transcription start site region 88891
Tssr88892 9 40321312 to 40321317 5 - TSS region transcription start site region 88892
Tssr88893 9 40321329 to 40321341 12 - TSS region transcription start site region 88893
Tssr88894 9 40321447 to 40321487 40 - TSS region transcription start site region 88894