Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:40092316-40313604

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfr983 9 40092017 to 40093558 1541 - protein coding gene olfactory receptor 983
Olfr984 9 40100544 to 40101488 944 - protein coding gene olfactory receptor 984
Olfr985 9 40126924 to 40128039 1115 - protein coding gene olfactory receptor 985
Gm35123 9 40136313 to 40143867 7554 + lncRNA gene predicted gene, 35123
Tssr84429 9 40148112 to 40148132 20 + TSS region transcription start site region 84429
Tmem225 9 40148122 to 40150880 2758 + protein coding gene transmembrane protein 225
Tssr84430 9 40148156 to 40148165 9 + TSS region transcription start site region 84430
Gm4893 9 40164343 to 40165027 684 + pseudogene predicted gene 4893
Olfr986 9 40187079 to 40188094 1015 + protein coding gene olfactory receptor 986
Tssr88876 9 40189509 to 40189514 5 - TSS region transcription start site region 88876
Tssr88877 9 40191121 to 40191125 4 - TSS region transcription start site region 88877
Cpgi21589 9 40192104 to 40193006 902 CpG island CpG island 21589
Tssr84431 9 40192308 to 40192337 29 + TSS region transcription start site region 84431
Zfp202 9 40192316 to 40213604 21288 + protein coding gene zinc finger protein 202
Tssr88878 9 40239872 to 40239885 13 - TSS region transcription start site region 88878
Tssr88879 9 40239897 to 40239921 24 - TSS region transcription start site region 88879
Cpgi21590 9 40241748 to 40241920 172 CpG island CpG island 21590
Cpgi21591 9 40269073 to 40269814 741 CpG island CpG island 21591
Tssr84432 9 40269202 to 40269265 63 + TSS region transcription start site region 84432
Scn3b 9 40269217 to 40291618 22401 + protein coding gene sodium channel, voltage-gated, type III, beta
Tssr84433 9 40269274 to 40269303 29 + TSS region transcription start site region 84433
Tssr84434 9 40269354 to 40269366 12 + TSS region transcription start site region 84434
Tssr84435 9 40269379 to 40269423 44 + TSS region transcription start site region 84435
Tssr84436 9 40269430 to 40269441 11 + TSS region transcription start site region 84436
Tssr84437 9 40269451 to 40269472 21 + TSS region transcription start site region 84437
Tssr84438 9 40269473 to 40269496 23 + TSS region transcription start site region 84438
Gm47266 9 40275903 to 40276532 629 - unclassified gene predicted gene, 47266
Tssr84439 9 40286091 to 40286095 4 + TSS region transcription start site region 84439
Gramd1b 9 40293233 to 40531383 238150 - protein coding gene GRAM domain containing 1B
Tssr88880 9 40295074 to 40295109 35 - TSS region transcription start site region 88880
D9Mit153.2 9 40300449 to 40300558 109 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 153.2
D9Mit153 9 40300517 to 40300626 109 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 153
Tssr88881 9 40306994 to 40307018 24 - TSS region transcription start site region 88881