Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:39961924-40293039

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfr977-ps1 9 39973879 to 39974821 942 - polymorphic pseudogene olfactory receptor 977, pseudogene 1
Olfr978 9 39993812 to 39994747 935 + protein coding gene olfactory receptor 978
Olfr979 9 40000206 to 40001250 1044 - protein coding gene olfactory receptor 979
Olfr980 9 40005994 to 40007029 1035 - protein coding gene olfactory receptor 980
Olfr981 9 40022395 to 40023327 932 + protein coding gene olfactory receptor 981
Tssr88875 9 40032501 to 40032506 5 - TSS region transcription start site region 88875
Gm18892 9 40039891 to 40040771 880 + pseudogene predicted gene, 18892
Tssr84426 9 40050360 to 40050382 22 + TSS region transcription start site region 84426
Tssr84427 9 40050388 to 40050409 21 + TSS region transcription start site region 84427
Tssr84428 9 40050419 to 40050424 5 + TSS region transcription start site region 84428
1700001J11Rik 9 40050558 to 40053025 2467 + pseudogene RIKEN cDNA 1700001J11 gene
Olfr982 9 40074297 to 40075262 965 + protein coding gene olfactory receptor 982
Cpgi21588 9 40074866 to 40075109 243 CpG island CpG island 21588
Olfr983 9 40092017 to 40093558 1541 - protein coding gene olfactory receptor 983
Olfr984 9 40100544 to 40101488 944 - protein coding gene olfactory receptor 984
Olfr985 9 40126924 to 40128039 1115 - protein coding gene olfactory receptor 985
Gm35123 9 40136313 to 40143867 7554 + lncRNA gene predicted gene, 35123
Tssr84429 9 40148112 to 40148132 20 + TSS region transcription start site region 84429
Tmem225 9 40148122 to 40150880 2758 + protein coding gene transmembrane protein 225
Tssr84430 9 40148156 to 40148165 9 + TSS region transcription start site region 84430
Gm4893 9 40164343 to 40165027 684 + pseudogene predicted gene 4893
Olfr986 9 40187079 to 40188094 1015 + protein coding gene olfactory receptor 986
Tssr88876 9 40189509 to 40189514 5 - TSS region transcription start site region 88876
Tssr88877 9 40191121 to 40191125 4 - TSS region transcription start site region 88877
Cpgi21589 9 40192104 to 40193006 902 CpG island CpG island 21589
Tssr84431 9 40192308 to 40192337 29 + TSS region transcription start site region 84431
Zfp202 9 40192316 to 40213604 21288 + protein coding gene zinc finger protein 202
Tssr88878 9 40239872 to 40239885 13 - TSS region transcription start site region 88878
Tssr88879 9 40239897 to 40239921 24 - TSS region transcription start site region 88879
Cpgi21590 9 40241748 to 40241920 172 CpG island CpG island 21590
Cpgi21591 9 40269073 to 40269814 741 CpG island CpG island 21591
Tssr84432 9 40269202 to 40269265 63 + TSS region transcription start site region 84432
Scn3b 9 40269217 to 40291618 22401 + protein coding gene sodium channel, voltage-gated, type III, beta
Tssr84433 9 40269274 to 40269303 29 + TSS region transcription start site region 84433
Tssr84434 9 40269354 to 40269366 12 + TSS region transcription start site region 84434
Tssr84435 9 40269379 to 40269423 44 + TSS region transcription start site region 84435
Tssr84436 9 40269430 to 40269441 11 + TSS region transcription start site region 84436
Tssr84437 9 40269451 to 40269472 21 + TSS region transcription start site region 84437
Tssr84438 9 40269473 to 40269496 23 + TSS region transcription start site region 84438
Gm47266 9 40275903 to 40276532 629 - unclassified gene predicted gene, 47266
Tssr84439 9 40286091 to 40286095 4 + TSS region transcription start site region 84439