Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:39329641-40310576

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfr949-ps1 9 39364552 to 39365480 928 + polymorphic pseudogene olfactory receptor 949, pseudogene 1
Olfr950-ps1 9 39383330 to 39384279 949 + pseudogene olfactory receptor 950, pseudogene 1
Olfr951 9 39393793 to 39394737 944 + protein coding gene olfactory receptor 951
Olfr952 9 39426125 to 39427069 944 - protein coding gene olfactory receptor 952
Olfr953-ps1 9 39452295 to 39453250 955 + pseudogene olfactory receptor 953, pseudogene 1
Olfr954 9 39461433 to 39462377 944 + protein coding gene olfactory receptor 954
Olfr955 9 39469780 to 39470724 944 - protein coding gene olfactory receptor 955
Olfr956-ps1 9 39473774 to 39474602 828 - pseudogene olfactory receptor 956, pseudogene 1
Olfr44 9 39484087 to 39493988 9901 - protein coding gene olfactory receptor 44
Olfr957 9 39510783 to 39511718 935 - protein coding gene olfactory receptor 957
Gm24278 9 39537826 to 39537952 126 - snoRNA gene predicted gene, 24278
Olfr958 9 39549931 to 39550869 938 - protein coding gene olfactory receptor 958
Olfr959 9 39572322 to 39573257 935 - protein coding gene olfactory receptor 959
D9Mit327 9 39584209 to 39584333 124 DNA segment DNA Segment, Chr 9 Massachusetts Institute of Technology 327
AW551984 9 39587396 to 39604403 17007 - protein coding gene expressed sequence AW551984
Tssr88871 9 39603551 to 39603603 52 - TSS region transcription start site region 88871
Tssr88872 9 39603608 to 39603632 24 - TSS region transcription start site region 88872
Tssr88873 9 39603635 to 39603646 11 - TSS region transcription start site region 88873
Tssr88874 9 39604259 to 39604276 17 - TSS region transcription start site region 88874
Olfr148 9 39613569 to 39614501 932 + protein coding gene olfactory receptor 148
Olfr960 9 39623125 to 39624165 1040 + protein coding gene olfactory receptor 960
Olfr961 9 39646728 to 39647672 944 + protein coding gene olfactory receptor 961
Olfr962-ps1 9 39658301 to 39658742 441 + pseudogene olfactory receptor 962, pseudogene 1
Olfr963 9 39669059 to 39669994 935 + protein coding gene olfactory receptor 963
Olfr964-ps1 9 39686029 to 39686942 913 - polymorphic pseudogene olfactory receptor 964, pseudogene 1
D9Mit1001 9 39695094 to 39695213 119 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 1001
Olfr149 9 39701832 to 39702767 935 - protein coding gene olfactory receptor 149
Olfr965 9 39719229 to 39720167 938 + protein coding gene olfactory receptor 965
Olfr966-ps1 9 39723965 to 39724541 576 + pseudogene olfactory receptor 966, pseudogene 1
Ebao1 9 39724362 to 46528572 6804210 QTL epidermolysis bullosa acquisita onset 1
Olfr150 9 39736817 to 39737755 938 + protein coding gene olfactory receptor 150
Olfr967 9 39750388 to 39751320 932 + protein coding gene olfactory receptor 967
Olfr968 9 39771772 to 39772798 1026 - protein coding gene olfactory receptor 968
Olfr969 9 39791025 to 39796617 5592 + protein coding gene olfactory receptor 969
Olfr970 9 39819641 to 39820576 935 + protein coding gene olfactory receptor 970
Gm47219 9 39821705 to 39821803 98 + pseudogene predicted gene, 47219
Olfr971 9 39839436 to 39840359 923 + protein coding gene olfactory receptor 971
Olfr972 9 39873277 to 39874221 944 + protein coding gene olfactory receptor 972
Olfr229 9 39909805 to 39910728 923 + protein coding gene olfactory receptor 229
Gm47229 9 39918271 to 39918519 248 - pseudogene predicted gene, 47229
Olfr974 9 39942059 to 39943194 1135 + protein coding gene olfactory receptor 974
Olfr975 9 39949837 to 39950769 932 - protein coding gene olfactory receptor 975
Olfr976 9 39954257 to 39961044 6787 - protein coding gene olfactory receptor 976
Olfr977-ps1 9 39973879 to 39974821 942 - polymorphic pseudogene olfactory receptor 977, pseudogene 1
Olfr978 9 39993812 to 39994747 935 + protein coding gene olfactory receptor 978
Olfr979 9 40000206 to 40001250 1044 - protein coding gene olfactory receptor 979
Olfr980 9 40005994 to 40007029 1035 - protein coding gene olfactory receptor 980
Olfr981 9 40022395 to 40023327 932 + protein coding gene olfactory receptor 981
Tssr88875 9 40032501 to 40032506 5 - TSS region transcription start site region 88875
Gm18892 9 40039891 to 40040771 880 + pseudogene predicted gene, 18892
Tssr84426 9 40050360 to 40050382 22 + TSS region transcription start site region 84426
Tssr84427 9 40050388 to 40050409 21 + TSS region transcription start site region 84427
Tssr84428 9 40050419 to 40050424 5 + TSS region transcription start site region 84428
1700001J11Rik 9 40050558 to 40053025 2467 + pseudogene RIKEN cDNA 1700001J11 gene
Olfr982 9 40074297 to 40075262 965 + protein coding gene olfactory receptor 982
Cpgi21588 9 40074866 to 40075109 243 CpG island CpG island 21588
Olfr983 9 40092017 to 40093558 1541 - protein coding gene olfactory receptor 983
Olfr984 9 40100544 to 40101488 944 - protein coding gene olfactory receptor 984
Olfr985 9 40126924 to 40128039 1115 - protein coding gene olfactory receptor 985
Gm35123 9 40136313 to 40143867 7554 + lncRNA gene predicted gene, 35123
Tssr84429 9 40148112 to 40148132 20 + TSS region transcription start site region 84429
Tmem225 9 40148122 to 40150880 2758 + protein coding gene transmembrane protein 225
Tssr84430 9 40148156 to 40148165 9 + TSS region transcription start site region 84430
Gm4893 9 40164343 to 40165027 684 + pseudogene predicted gene 4893
Olfr986 9 40187079 to 40188094 1015 + protein coding gene olfactory receptor 986
Tssr88876 9 40189509 to 40189514 5 - TSS region transcription start site region 88876
Tssr88877 9 40191121 to 40191125 4 - TSS region transcription start site region 88877
Cpgi21589 9 40192104 to 40193006 902 CpG island CpG island 21589
Tssr84431 9 40192308 to 40192337 29 + TSS region transcription start site region 84431
Zfp202 9 40192316 to 40213604 21288 + protein coding gene zinc finger protein 202
Tssr88878 9 40239872 to 40239885 13 - TSS region transcription start site region 88878
Tssr88879 9 40239897 to 40239921 24 - TSS region transcription start site region 88879
Cpgi21590 9 40241748 to 40241920 172 CpG island CpG island 21590
Cpgi21591 9 40269073 to 40269814 741 CpG island CpG island 21591
Tssr84432 9 40269202 to 40269265 63 + TSS region transcription start site region 84432
Scn3b 9 40269217 to 40291618 22401 + protein coding gene sodium channel, voltage-gated, type III, beta
Tssr84433 9 40269274 to 40269303 29 + TSS region transcription start site region 84433
Tssr84434 9 40269354 to 40269366 12 + TSS region transcription start site region 84434
Tssr84435 9 40269379 to 40269423 44 + TSS region transcription start site region 84435
Tssr84436 9 40269430 to 40269441 11 + TSS region transcription start site region 84436
Tssr84437 9 40269451 to 40269472 21 + TSS region transcription start site region 84437
Tssr84438 9 40269473 to 40269496 23 + TSS region transcription start site region 84438
Gm47266 9 40275903 to 40276532 629 - unclassified gene predicted gene, 47266
Tssr84439 9 40286091 to 40286095 4 + TSS region transcription start site region 84439
Gramd1b 9 40293233 to 40531383 238150 - protein coding gene GRAM domain containing 1B
Tssr88880 9 40295074 to 40295109 35 - TSS region transcription start site region 88880
D9Mit153.2 9 40300449 to 40300558 109 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 153.2
D9Mit153 9 40300517 to 40300626 109 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 153
Tssr88881 9 40306994 to 40307018 24 - TSS region transcription start site region 88881