Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:37018656-37220064

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pknox2	9	36890979 to 37147327	256348	-	protein coding gene	Pbx/knotted 1 homeobox 2
Gm3896	9	37015758 to 37020671	4913	+	antisense lncRNA gene	predicted gene 3896
Tssr88816	9	37019825 to 37019849	24	-	TSS region	transcription start site region 88816
n-R5s82	9	37026399 to 37026507	108	+	rRNA gene	nuclear encoded rRNA 5S 82
Lmr2	9	37032110 to 50199840	13167730		QTL	leishmaniasis resistance 2
Pvcan2	9	37032110 to 37032229	119		QTL	protection against vaginal candidiasis 2
D9Mit67	9	37032110 to 37032229	119		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 67
Gm34538	9	37034688 to 37069714	35026	+	lncRNA gene	predicted gene, 34538
Gm48716	9	37118656 to 37120064	1408	+	antisense lncRNA gene	predicted gene, 48716
D9Mit247	9	37132907 to 37133055	148		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 247
Gm48717	9	37138553 to 37139624	1071	-	unclassified gene	predicted gene, 48717
Cpgi21567	9	37145148 to 37147580	2432		CpG island	CpG island 21567
Tssr88817	9	37147257 to 37147323	66	-	TSS region	transcription start site region 88817
Gm25273	9	37172880 to 37172994	114	-	snoRNA gene	predicted gene, 25273
Cpgi21568	9	37207929 to 37208480	551		CpG island	CpG island 21568
Tssr88818	9	37208031 to 37208034	3	-	TSS region	transcription start site region 88818
Tssr84374	9	37208176 to 37208195	19	+	TSS region	transcription start site region 84374
Tmem218	9	37208223 to 37223228	15005	+	protein coding gene	transmembrane protein 218
Tssr84375	9	37208291 to 37208360	69	+	TSS region	transcription start site region 84375