Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:37018656-37220064

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pknox2 9 36890979 to 37147327 256348 - protein coding gene Pbx/knotted 1 homeobox 2
Gm3896 9 37015758 to 37020671 4913 + antisense lncRNA gene predicted gene 3896
Tssr88816 9 37019825 to 37019849 24 - TSS region transcription start site region 88816
n-R5s82 9 37026399 to 37026507 108 + rRNA gene nuclear encoded rRNA 5S 82
Lmr2 9 37032110 to 50199840 13167730 QTL leishmaniasis resistance 2
Pvcan2 9 37032110 to 37032229 119 QTL protection against vaginal candidiasis 2
D9Mit67 9 37032110 to 37032229 119 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 67
Gm34538 9 37034688 to 37069714 35026 + lncRNA gene predicted gene, 34538
Gm48716 9 37118656 to 37120064 1408 + antisense lncRNA gene predicted gene, 48716
D9Mit247 9 37132907 to 37133055 148 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 247
Gm48717 9 37138553 to 37139624 1071 - unclassified gene predicted gene, 48717
Cpgi21567 9 37145148 to 37147580 2432 CpG island CpG island 21567
Tssr88817 9 37147257 to 37147323 66 - TSS region transcription start site region 88817
Gm25273 9 37172880 to 37172994 114 - snoRNA gene predicted gene, 25273
Cpgi21568 9 37207929 to 37208480 551 CpG island CpG island 21568
Tssr88818 9 37208031 to 37208034 3 - TSS region transcription start site region 88818
Tssr84374 9 37208176 to 37208195 19 + TSS region transcription start site region 84374
Tmem218 9 37208223 to 37223228 15005 + protein coding gene transmembrane protein 218
Tssr84375 9 37208291 to 37208360 69 + TSS region transcription start site region 84375