Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:36829825-37209849

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fez1 9 36821891 to 36878927 57036 + protein coding gene fasciculation and elongation protein zeta 1 (zygin I)
Cpgi21565 9 36832613 to 36832945 332 CpG island CpG island 21565
Tssr84372 9 36832700 to 36832855 155 + TSS region transcription start site region 84372
Cpgi21566 9 36833347 to 36833750 403 CpG island CpG island 21566
2900046B09Rik 9 36847744 to 36848420 676 unclassified gene RIKEN cDNA 2900046B09 gene
Tssr84373 9 36850377 to 36850392 15 + TSS region transcription start site region 84373
Pknox2 9 36890979 to 37147327 256348 - protein coding gene Pbx/knotted 1 homeobox 2
Tssr88815 9 36923619 to 36923628 9 - TSS region transcription start site region 88815
D9Mit252 9 36969136 to 36969250 114 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 252
Gm34652 9 36972672 to 36979931 7259 + lncRNA gene predicted gene, 34652
Tssr2826 9 37008198 to 37008200 2 + TSS region transcription start site region 2826
Gm3896 9 37015758 to 37020671 4913 + antisense lncRNA gene predicted gene 3896
Tssr88816 9 37019825 to 37019849 24 - TSS region transcription start site region 88816
n-R5s82 9 37026399 to 37026507 108 + rRNA gene nuclear encoded rRNA 5S 82
Lmr2 9 37032110 to 50199840 13167730 QTL leishmaniasis resistance 2
Pvcan2 9 37032110 to 37032229 119 QTL protection against vaginal candidiasis 2
D9Mit67 9 37032110 to 37032229 119 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 67
Gm34538 9 37034688 to 37069714 35026 + lncRNA gene predicted gene, 34538
Gm48716 9 37118656 to 37120064 1408 + antisense lncRNA gene predicted gene, 48716
D9Mit247 9 37132907 to 37133055 148 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 247
Gm48717 9 37138553 to 37139624 1071 - unclassified gene predicted gene, 48717
Cpgi21567 9 37145148 to 37147580 2432 CpG island CpG island 21567
Tssr88817 9 37147257 to 37147323 66 - TSS region transcription start site region 88817
Gm25273 9 37172880 to 37172994 114 - snoRNA gene predicted gene, 25273
Cpgi21568 9 37207929 to 37208480 551 CpG island CpG island 21568
Tssr88818 9 37208031 to 37208034 3 - TSS region transcription start site region 88818
Tssr84374 9 37208176 to 37208195 19 + TSS region transcription start site region 84374
Tmem218 9 37208223 to 37223228 15005 + protein coding gene transmembrane protein 218
Tssr84375 9 37208291 to 37208360 69 + TSS region transcription start site region 84375