Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Elnv | 9 | 6034812 | QTL | epilepsy naive | ||
Tlf | 9 | 2468622 | QTL | T lymphocyte fraction | ||
Gm49367 | 9 | 57216 | - | unclassified non-coding RNA gene | predicted gene, 49367 | |
1700027I24Rik | 9 | 24333 | - | bidirectional promoter lncRNA gene | RIKEN cDNA 1700027I24 gene | |
Tssr88790 | 9 | 12 | - | TSS region | transcription start site region 88790 | |
Tssr88791 | 9 | 11 | - | TSS region | transcription start site region 88791 | |
Tssr88792 | 9 | 6 | - | TSS region | transcription start site region 88792 | |
Tssr88793 | 9 | 6 | - | TSS region | transcription start site region 88793 | |
Tssr84366 | 9 | 4 | + | TSS region | transcription start site region 84366 | |
Acrv1 | 9 | 5617 | + | protein coding gene | acrosomal vesicle protein 1 | |
Tssr84367 | 9 | 7 | + | TSS region | transcription start site region 84367 | |
Tssr84368 | 9 | 9 | + | TSS region | transcription start site region 84368 | |
Chek1 | 9 | 18176 | - | protein coding gene | checkpoint kinase 1 | |
Tssr88794 | 9 | 15 | - | TSS region | transcription start site region 88794 | |
Cpgi21562 | 9 | 929 | CpG island | CpG island 21562 | ||
Tssr88795 | 9 | 19 | - | TSS region | transcription start site region 88795 | |
Tssr88796 | 9 | 9 | - | TSS region | transcription start site region 88796 | |
Tssr84369 | 9 | 47 | + | TSS region | transcription start site region 84369 | |
Stt3a | 9 | 38334 | - | protein coding gene | STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) | |
Tssr88797 | 9 | 3 | - | TSS region | transcription start site region 88797 | |
Tssr88798 | 9 | 5 | - | TSS region | transcription start site region 88798 | |
Tssr88799 | 9 | 11 | - | TSS region | transcription start site region 88799 | |
Tssr88800 | 9 | 15 | - | TSS region | transcription start site region 88800 | |
Tssr88801 | 9 | 14 | - | TSS region | transcription start site region 88801 | |
Tssr88802 | 9 | 4 | - | TSS region | transcription start site region 88802 | |
Cpgi21563 | 9 | 1118 | CpG island | CpG island 21563 | ||
Tssr88803 | 9 | 14 | - | TSS region | transcription start site region 88803 | |
Tssr88804 | 9 | 43 | - | TSS region | transcription start site region 88804 | |
Gm26787 | 9 | 14534 | + | antisense lncRNA gene | predicted gene, 26787 | |
Tssr84370 | 9 | 11 | + | TSS region | transcription start site region 84370 | |
Tssr84371 | 9 | 19 | + | TSS region | transcription start site region 84371 | |
Ei24 | 9 | 18234 | - | protein coding gene | etoposide induced 2.4 mRNA | |
Tssr88805 | 9 | 12 | - | TSS region | transcription start site region 88805 | |
Tssr88806 | 9 | 15 | - | TSS region | transcription start site region 88806 | |
Tssr88807 | 9 | 19 | - | TSS region | transcription start site region 88807 | |
Tssr88808 | 9 | 17 | - | TSS region | transcription start site region 88808 | |
Tssr88809 | 9 | 28 | - | TSS region | transcription start site region 88809 | |
Tssr88810 | 9 | 7 | - | TSS region | transcription start site region 88810 | |
Tssr88811 | 9 | 18 | - | TSS region | transcription start site region 88811 | |
Cpgi21564 | 9 | 705 | CpG island | CpG island 21564 | ||
Tssr88812 | 9 | 11 | - | TSS region | transcription start site region 88812 | |
Tssr88813 | 9 | 122 | - | TSS region | transcription start site region 88813 | |
Tssr88814 | 9 | 5 | - | TSS region | transcription start site region 88814 | |
Gm27219 | 9 | 741 | - | pseudogene | predicted gene 27219 | |
Fez1 | 9 | 57036 | + | protein coding gene | fasciculation and elongation protein zeta 1 (zygin I) | |
Rapop7 | 9 | 12684264 | QTL | radiation-induced apoptosis 6 | ||
D9Mit224 | 9 | 110 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 224 | ||
D9Mit128 | 9 | 141 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 128 | ||
Cpgi21565 | 9 | 332 | CpG island | CpG island 21565 | ||
Tssr84372 | 9 | 155 | + | TSS region | transcription start site region 84372 | |
Cpgi21566 | 9 | 403 | CpG island | CpG island 21566 | ||
2900046B09Rik | 9 | 676 | unclassified gene | RIKEN cDNA 2900046B09 gene | ||
Tssr84373 | 9 | 15 | + | TSS region | transcription start site region 84373 | |
Pknox2 | 9 | 256348 | - | protein coding gene | Pbx/knotted 1 homeobox 2 | |
Tssr88815 | 9 | 9 | - | TSS region | transcription start site region 88815 | |
D9Mit252 | 9 | 114 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 252 | ||
Gm34652 | 9 | 7259 | + | lncRNA gene | predicted gene, 34652 | |
Tssr2826 | 9 | 2 | + | TSS region | transcription start site region 2826 | |
Gm3896 | 9 | 4913 | + | antisense lncRNA gene | predicted gene 3896 | |
Tssr88816 | 9 | 24 | - | TSS region | transcription start site region 88816 | |
n-R5s82 | 9 | 108 | + | rRNA gene | nuclear encoded rRNA 5S 82 | |
D9Mit67 | 9 | 119 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 67 | ||
Pvcan2 | 9 | 119 | QTL | protection against vaginal candidiasis 2 | ||
Lmr2 | 9 | 13167730 | QTL | leishmaniasis resistance 2 | ||
Gm34538 | 9 | 35026 | + | lncRNA gene | predicted gene, 34538 | |
Gm48716 | 9 | 1408 | + | antisense lncRNA gene | predicted gene, 48716 | |
D9Mit247 | 9 | 148 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 247 | ||
Gm48717 | 9 | 1071 | - | unclassified gene | predicted gene, 48717 | |
Cpgi21567 | 9 | 2432 | CpG island | CpG island 21567 | ||
Tssr88817 | 9 | 66 | - | TSS region | transcription start site region 88817 | |
Gm25273 | 9 | 114 | - | snoRNA gene | predicted gene, 25273 | |
Cpgi21568 | 9 | 551 | CpG island | CpG island 21568 | ||
Tssr88818 | 9 | 3 | - | TSS region | transcription start site region 88818 | |
Tssr84374 | 9 | 19 | + | TSS region | transcription start site region 84374 | |
Tmem218 | 9 | 15005 | + | protein coding gene | transmembrane protein 218 | |
Tssr84375 | 9 | 69 | + | TSS region | transcription start site region 84375 | |
Slc37a2 | 9 | 26589 | - | protein coding gene | solute carrier family 37 (glycerol-3-phosphate transporter), member 2 | |
Tssr88819 | 9 | 18 | - | TSS region | transcription start site region 88819 | |
Tssr88820 | 9 | 3 | - | TSS region | transcription start site region 88820 | |
Morph2 | 9 | 130 | QTL | morphine antinociception 2 | ||
D9Mit91 | 9 | 130 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 91 | ||
Pid2 | 9 | 7097960 | QTL | prion incubation determinant 2 | ||
Tssr84376 | 9 | 47 | + | TSS region | transcription start site region 84376 | |
Gm10177 | 9 | 443 | + | pseudogene | predicted gene 10177 | |
Cpgi21569 | 9 | 415 | CpG island | CpG island 21569 | ||
Tssr88821 | 9 | 7 | - | TSS region | transcription start site region 88821 | |
Tssr88822 | 9 | 11 | - | TSS region | transcription start site region 88822 | |
Tssr88823 | 9 | 16 | - | TSS region | transcription start site region 88823 | |
Tssr88824 | 9 | 13 | - | TSS region | transcription start site region 88824 | |
Tssr88825 | 9 | 17 | - | TSS region | transcription start site region 88825 | |
Gm48081 | 9 | 651 | + | antisense lncRNA gene | predicted gene, 48081 | |
Tssr88826 | 9 | 23 | - | TSS region | transcription start site region 88826 | |
Tssr88827 | 9 | 12 | - | TSS region | transcription start site region 88827 | |
Tssr88828 | 9 | 19 | - | TSS region | transcription start site region 88828 | |
Tssr88829 | 9 | 14 | - | TSS region | transcription start site region 88829 | |
Tssr88830 | 9 | 26 | - | TSS region | transcription start site region 88830 | |
Tssr88831 | 9 | 14 | - | TSS region | transcription start site region 88831 | |
Gm47633 | 9 | 566 | - | lincRNA gene | predicted gene, 47633 | |
Gm47640 | 9 | 2881 | + | unclassified gene | predicted gene, 47640 | |
Gm18329 | 9 | 572 | + | pseudogene | predicted gene, 18329 | |
Ccdc15 | 9 | 72597 | - | protein coding gene | coiled-coil domain containing 15 | |
Gm47643 | 9 | 3235 | - | unclassified gene | predicted gene, 47643 | |
D9Mit205 | 9 | 193 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 205 | ||
Gm34885 | 9 | 12300 | + | antisense lncRNA gene | predicted gene, 34885 | |
Gm47652 | 9 | 4662 | - | unclassified gene | predicted gene, 47652 | |
Cpgi21570 | 9 | 581 | CpG island | CpG island 21570 | ||
Tssr88832 | 9 | 9 | - | TSS region | transcription start site region 88832 | |
Tssr88833 | 9 | 27 | - | TSS region | transcription start site region 88833 | |
Tssr88834 | 9 | 22 | - | TSS region | transcription start site region 88834 | |
Tssr88835 | 9 | 27 | - | TSS region | transcription start site region 88835 | |
Tssr84377 | 9 | 59 | + | TSS region | transcription start site region 84377 | |
Tssr84378 | 9 | 9 | + | TSS region | transcription start site region 84378 | |
Tssr84379 | 9 | 13 | + | TSS region | transcription start site region 84379 | |
Tssr84380 | 9 | 24 | + | TSS region | transcription start site region 84380 | |
Hepacam | 9 | 18966 | + | protein coding gene | hepatocyte cell adhesion molecule | |
Tssr84381 | 9 | 29 | + | TSS region | transcription start site region 84381 | |
Tssr84382 | 9 | 6 | + | TSS region | transcription start site region 84382 | |
Tssr84383 | 9 | 5 | + | TSS region | transcription start site region 84383 | |
Tssr84384 | 9 | 29 | + | TSS region | transcription start site region 84384 | |
Cpgi21571 | 9 | 288 | CpG island | CpG island 21571 | ||
Cpgi21572 | 9 | 747 | CpG island | CpG island 21572 | ||
Tssr84385 | 9 | 15 | + | TSS region | transcription start site region 84385 | |
Tssr84386 | 9 | 15 | + | TSS region | transcription start site region 84386 | |
Alpq3 | 9 | 61424753 | QTL | alcohol preference QTL 3 | ||
D9Mit2 | 9 | 173 | DNA segment | DNA segment, Chr 9, Massachusetts Institute of Technology 2 | ||
Skull12 | 9 | 173 | QTL | skull morphology 12 | ||
Lmr17 | 9 | 173 | QTL | leishmaniasis resistance 17 | ||
Sluc10 | 9 | 173 | QTL | susceptibility to lung cancer 10 | ||
Pbft5 | 9 | 173 | QTL | percent body fat 5 | ||
Sles4 | 9 | -28287513 | QTL | systemic lupus erythmatosus suppressor 4 | ||
Tssr84387 | 9 | 7 | + | TSS region | transcription start site region 84387 | |
Robo4 | 9 | 12126 | + | protein coding gene | roundabout guidance receptor 4 | |
Tssr84388 | 9 | 17 | + | TSS region | transcription start site region 84388 | |
Tssr84389 | 9 | 64 | + | TSS region | transcription start site region 84389 | |
Tssr84390 | 9 | 11 | + | TSS region | transcription start site region 84390 | |
Robo3 | 9 | 17390 | - | protein coding gene | roundabout guidance receptor 3 | |
Cpgi21573 | 9 | 911 | CpG island | CpG island 21573 | ||
Cpgi21574 | 9 | 346 | CpG island | CpG island 21574 | ||
Tssr88836 | 9 | 16 | - | TSS region | transcription start site region 88836 | |
Cpgi21575 | 9 | 538 | CpG island | CpG island 21575 | ||
Tssr88837 | 9 | 11 | - | TSS region | transcription start site region 88837 | |
Tssr88838 | 9 | 29 | - | TSS region | transcription start site region 88838 | |
Tssr88839 | 9 | 4 | - | TSS region | transcription start site region 88839 | |
Tssr84391 | 9 | 39 | + | TSS region | transcription start site region 84391 | |
Cpgi21576 | 9 | 441 | CpG island | CpG island 21576 | ||
Cpgi21577 | 9 | 993 | CpG island | CpG island 21577 | ||
Gm47945 | 9 | 190 | - | pseudogene | predicted gene, 47945 | |
BB236558 | 9 | 1120 | unclassified gene | expressed sequence BB236558 | ||
Tssr84392 | 9 | 12 | + | TSS region | transcription start site region 84392 | |
Cpgi21578 | 9 | 1500 | CpG island | CpG island 21578 | ||
Tssr84393 | 9 | 11 | + | TSS region | transcription start site region 84393 | |
Tssr84394 | 9 | 27 | + | TSS region | transcription start site region 84394 | |
Tssr2827 | 9 | 17 | + | TSS region | transcription start site region 2827 | |
Tssr84395 | 9 | 45 | + | TSS region | transcription start site region 84395 | |
Msantd2 | 9 | 35306 | + | protein coding gene | Myb/SANT-like DNA-binding domain containing 2 | |
Tssr88840 | 9 | 24 | - | TSS region | transcription start site region 88840 | |
Gm47963 | 9 | 2143 | + | unclassified gene | predicted gene, 47963 | |
Cpgi21579 | 9 | 516 | CpG island | CpG island 21579 | ||
Tssr84396 | 9 | 11 | + | TSS region | transcription start site region 84396 | |
Tssr84397 | 9 | 77 | + | TSS region | transcription start site region 84397 | |
Esam | 9 | 10230 | + | protein coding gene | endothelial cell-specific adhesion molecule | |
Cpgi21580 | 9 | 421 | CpG island | CpG island 21580 | ||
Cpgi21581 | 9 | 391 | CpG island | CpG island 21581 | ||
Tssr84398 | 9 | 17 | + | TSS region | transcription start site region 84398 | |
Vsig2 | 9 | 4950 | + | protein coding gene | V-set and immunoglobulin domain containing 2 | |
Tssr84399 | 9 | 14 | + | TSS region | transcription start site region 84399 | |
Cpgi21582 | 9 | 236 | CpG island | CpG island 21582 | ||
Nrgn | 9 | 8252 | - | protein coding gene | neurogranin | |
Tssr88841 | 9 | 10 | - | TSS region | transcription start site region 88841 | |
Tssr88842 | 9 | 13 | - | TSS region | transcription start site region 88842 | |
Tssr84400 | 9 | 5 | + | TSS region | transcription start site region 84400 | |
Cpgi21583 | 9 | 353 | CpG island | CpG island 21583 | ||
Tssr88843 | 9 | 52 | - | TSS region | transcription start site region 88843 | |
Tssr84401 | 9 | 11 | + | TSS region | transcription start site region 84401 | |
Tssr88844 | 9 | 11 | - | TSS region | transcription start site region 88844 | |
Tssr84402 | 9 | 7 | + | TSS region | transcription start site region 84402 | |
Tssr88845 | 9 | 10 | - | TSS region | transcription start site region 88845 | |
Tssr88846 | 9 | 17 | - | TSS region | transcription start site region 88846 | |
Tssr84403 | 9 | 5 | + | TSS region | transcription start site region 84403 | |
Tssr88847 | 9 | 13 | - | TSS region | transcription start site region 88847 | |
Tssr88848 | 9 | 19 | - | TSS region | transcription start site region 88848 | |
Tssr84404 | 9 | 17 | + | TSS region | transcription start site region 84404 | |
Tssr84405 | 9 | 10 | + | TSS region | transcription start site region 84405 | |
Tssr88849 | 9 | 22 | - | TSS region | transcription start site region 88849 | |
Tssr88850 | 9 | 21 | - | TSS region | transcription start site region 88850 | |
Tssr84406 | 9 | 7 | + | TSS region | transcription start site region 84406 | |
Tssr88851 | 9 | 31 | - | TSS region | transcription start site region 88851 | |
Tssr84407 | 9 | 20 | + | TSS region | transcription start site region 84407 | |
Tssr84408 | 9 | 22 | + | TSS region | transcription start site region 84408 | |
Tssr88852 | 9 | 19 | - | TSS region | transcription start site region 88852 | |
Tssr88853 | 9 | 7 | - | TSS region | transcription start site region 88853 | |
Tssr88854 | 9 | 12 | - | TSS region | transcription start site region 88854 | |
Cpgi21584 | 9 | 180 | CpG island | CpG island 21584 | ||
Tssr84409 | 9 | 8 | + | TSS region | transcription start site region 84409 | |
Tssr88855 | 9 | 31 | - | TSS region | transcription start site region 88855 | |
Tssr88856 | 9 | 52 | - | TSS region | transcription start site region 88856 | |
Tssr88857 | 9 | 4 | - | TSS region | transcription start site region 88857 | |
Cpgi21585 | 9 | 484 | CpG island | CpG island 21585 | ||
Tssr88858 | 9 | 47 | - | TSS region | transcription start site region 88858 | |
Tssr88859 | 9 | 16 | - | TSS region | transcription start site region 88859 |