Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:35644518-36294522

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pate2 9 35611800 to 35672889 61089 + protein coding gene prostate and testis expressed 2
Pate3 9 35645113 to 35648202 3089 - protein coding gene prostate and testis expressed 3
Tssr88758 9 35648169 to 35648180 11 - TSS region transcription start site region 88758
Tssr88759 9 35648193 to 35648208 15 - TSS region transcription start site region 88759
Tssr84351 9 35669624 to 35669678 54 + TSS region transcription start site region 84351
Tssr84352 9 35672664 to 35672675 11 + TSS region transcription start site region 84352
Tssr84353 9 35672833 to 35672864 31 + TSS region transcription start site region 84353
Pate1 9 35685079 to 35687371 2292 - protein coding gene prostate and testis expressed 1
Tssr88760 9 35687014 to 35687033 19 - TSS region transcription start site region 88760
Tssr88761 9 35687386 to 35687391 5 - TSS region transcription start site region 88761
Tssr84354 9 35740902 to 35740907 5 + TSS region transcription start site region 84354
Tssr84355 9 35740957 to 35740966 9 + TSS region transcription start site region 84355
Tssr84356 9 35740970 to 35740971 1 + TSS region transcription start site region 84356
Tssr84357 9 35740982 to 35740989 7 + TSS region transcription start site region 84357
Tssr84358 9 35741030 to 35741034 4 + TSS region transcription start site region 84358
Pate10 9 35741049 to 35742252 1203 + protein coding gene prostate and testis expressed 10
Gm27235 9 35776524 to 35790101 13577 - protein coding gene predicted gene 27235
Pate7 9 35776524 to 35778109 1585 - protein coding gene prostate and testis expressed 7
Tssr88762 9 35777922 to 35777932 10 - TSS region transcription start site region 88762
Tssr88763 9 35777940 to 35777952 12 - TSS region transcription start site region 88763
Pate6 9 35788050 to 35790112 2062 - protein coding gene prostate and testis expressed 6
Tssr88764 9 35790075 to 35790090 15 - TSS region transcription start site region 88764
Tssr88765 9 35790101 to 35790106 5 - TSS region transcription start site region 88765
Gm36974 9 35835387 to 35836457 1070 + unclassified gene predicted gene, 36974
Pate5 9 35838329 to 35844150 5821 - protein coding gene prostate and testis expressed 5
Tssr88766 9 35844065 to 35844088 23 - TSS region transcription start site region 88766
Tssr88767 9 35844094 to 35844106 12 - TSS region transcription start site region 88767
Tssr88768 9 35844179 to 35844197 18 - TSS region transcription start site region 88768
Tssr88769 9 35844203 to 35844219 16 - TSS region transcription start site region 88769
Tssr88770 9 35844222 to 35844233 11 - TSS region transcription start site region 88770
Gm3428 9 35848545 to 35849880 1335 - lncRNA gene predicted gene 3428
Tssr88771 9 35849900 to 35849905 5 - TSS region transcription start site region 88771
Tssr88772 9 35849926 to 35849938 12 - TSS region transcription start site region 88772
Tssr88773 9 35849972 to 35849997 25 - TSS region transcription start site region 88773
Tssr84359 9 35908302 to 35908304 2 + TSS region transcription start site region 84359
Tssr2824 9 35908362 to 35908366 4 + TSS region transcription start site region 2824
Tssr2825 9 35908385 to 35908393 8 + TSS region transcription start site region 2825
Tssr84360 9 35908412 to 35908423 11 + TSS region transcription start site region 84360
Pate13 9 35908423 to 35910796 2373 + protein coding gene prostate and testis expressed 13
Tssr84361 9 35909592 to 35909599 7 + TSS region transcription start site region 84361
Tssr88774 9 35934365 to 35934366 1 - TSS region transcription start site region 88774
Gm27187 9 35960687 to 36011558 50871 - lincRNA gene predicted gene 27187
Tssr88775 9 35969518 to 35969522 4 - TSS region transcription start site region 88775
Gm48348 9 36089920 to 36092359 2439 - pseudogene predicted gene, 48348
Gm5916 9 36119934 to 36128779 8845 - protein coding gene predicted gene 5916
Gm3434 9 36134287 to 36135630 1343 - lincRNA gene predicted gene 3434
Tssr88776 9 36135626 to 36135634 8 - TSS region transcription start site region 88776
Gm48391 9 36249948 to 36263066 13118 + pseudogene predicted gene, 48391
Gm3867 9 36257803 to 36258321 518 - lincRNA gene predicted gene 3867