Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:35104531-35295293

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
St3gal4 9 35046576 to 35116810 70234 - protein coding gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4
Cpgi21550 9 35116253 to 35117281 1028 CpG island CpG island 21550
4930581F22Rik 9 35116728 to 35130922 14194 + lncRNA gene RIKEN cDNA 4930581F22 gene
Tssr84325 9 35116740 to 35116767 27 + TSS region transcription start site region 84325
Tssr88717 9 35116760 to 35116793 33 - TSS region transcription start site region 88717
Tssr88718 9 35116804 to 35116891 87 - TSS region transcription start site region 88718
Tssr84326 9 35116930 to 35116946 16 + TSS region transcription start site region 84326
Tssr88719 9 35116975 to 35116986 11 - TSS region transcription start site region 88719
Tssr88720 9 35117694 to 35117757 63 - TSS region transcription start site region 88720
Tssr88721 9 35119135 to 35119144 9 - TSS region transcription start site region 88721
Tssr88722 9 35119190 to 35119212 22 - TSS region transcription start site region 88722
Dcps 9 35124414 to 35175987 51573 - protein coding gene decapping enzyme, scavenger
Tssr84327 9 35127865 to 35127876 11 + TSS region transcription start site region 84327
Gm24262 9 35144636 to 35144779 143 + snoRNA gene predicted gene, 24262
Cpgi21551 9 35175629 to 35176256 627 CpG island CpG island 21551
Tssr88723 9 35175971 to 35176021 50 - TSS region transcription start site region 88723
Tssr88724 9 35176039 to 35176051 12 - TSS region transcription start site region 88724
Tssr88725 9 35176052 to 35176055 3 - TSS region transcription start site region 88725
Tirap 9 35184551 to 35200291 15740 - protein coding gene toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
Tssr88726 9 35185463 to 35185467 4 - TSS region transcription start site region 88726
Cpgi21552 9 35188730 to 35189190 460 CpG island CpG island 21552
Gm39318 9 35189986 to 35193924 3938 + antisense lncRNA gene predicted gene, 39318
Tssr2822 9 35194143 to 35194155 12 - TSS region transcription start site region 2822
Tssr88727 9 35194543 to 35194550 7 - TSS region transcription start site region 88727
Cpgi21553 9 35199531 to 35200293 762 CpG island CpG island 21553
Tssr88728 9 35199877 to 35199920 43 - TSS region transcription start site region 88728
Foxred1 9 35204208 to 35211055 6847 - protein coding gene FAD-dependent oxidoreductase domain containing 1
Cpgi21554 9 35210530 to 35211797 1267 CpG island CpG island 21554
Tssr88729 9 35210899 to 35210960 61 - TSS region transcription start site region 88729
Tssr88730 9 35210964 to 35210987 23 - TSS region transcription start site region 88730
Tssr84328 9 35211177 to 35211224 47 + TSS region transcription start site region 84328
Srpr 9 35211203 to 35217003 5800 + protein coding gene signal recognition particle receptor ('docking protein')
Tssr84329 9 35211229 to 35211248 19 + TSS region transcription start site region 84329
Tssr84330 9 35211253 to 35211264 11 + TSS region transcription start site region 84330
Tssr84331 9 35211289 to 35211301 12 + TSS region transcription start site region 84331
Tssr84332 9 35211421 to 35211454 33 + TSS region transcription start site region 84332
Fam118b 9 35216965 to 35267805 50840 - protein coding gene family with sequence similarity 118, member B
Cpgi21555 9 35267220 to 35268415 1195 CpG island CpG island 21555
Tssr88731 9 35267746 to 35267786 40 - TSS region transcription start site region 88731
Tssr84333 9 35267857 to 35267894 37 + TSS region transcription start site region 84333
Rpusd4 9 35267881 to 35275957 8076 + protein coding gene RNA pseudouridylate synthase domain containing 4
Tssr84334 9 35279524 to 35279528 4 + TSS region transcription start site region 84334
4933422A05Rik 9 35281105 to 35285423 4318 + lincRNA gene RIKEN cDNA 4933422A05 gene
Gm5614 9 35281518 to 35281835 317 - pseudogene predicted gene 5614