Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:34850441-35150446

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kirrel3 9 34485848 to 35036315 550467 + protein coding gene kirre like nephrin family adhesion molecule 3
Gm33561 9 34823247 to 34854379 31132 - lncRNA gene predicted gene, 33561
Gm45955 9 34860082 to 34870544 10462 - lncRNA gene predicted gene, 45955
Kirrel3os 9 34918233 to 34929509 11276 - antisense lncRNA gene kirre like nephrin family adhesion molecule 3, opposite strand
D9Mit66 9 34926452 to 34926575 123 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 66
Tlf 9 34926452 to 37395074 2468622 QTL T lymphocyte fraction
Tssr88706 9 34948786 to 34948799 13 - TSS region transcription start site region 88706
Tssr2820 9 34948829 to 34948836 7 - TSS region transcription start site region 2820
Gm23702 9 34960019 to 34960148 129 + rRNA gene predicted gene, 23702
Tssr2821 9 35000441 to 35000446 5 + TSS region transcription start site region 2821
Tssr88707 9 35005776 to 35005818 42 - TSS region transcription start site region 88707
Cpgi21548 9 35017599 to 35017939 340 CpG island CpG island 21548
Cpgi21549 9 35034857 to 35035288 431 CpG island CpG island 21549
St3gal4 9 35046576 to 35116810 70234 - protein coding gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4
Tssr88708 9 35053740 to 35053744 4 - TSS region transcription start site region 88708
Tssr88709 9 35054102 to 35054131 29 - TSS region transcription start site region 88709
Tssr84324 9 35054233 to 35054238 5 + TSS region transcription start site region 84324
Tssr88710 9 35055658 to 35055669 11 - TSS region transcription start site region 88710
Tssr88711 9 35055785 to 35055808 23 - TSS region transcription start site region 88711
Tssr88712 9 35070353 to 35070358 5 - TSS region transcription start site region 88712
Tssr88713 9 35099046 to 35099057 11 - TSS region transcription start site region 88713
Tssr88714 9 35099062 to 35099078 16 - TSS region transcription start site region 88714
Tssr88715 9 35099080 to 35099087 7 - TSS region transcription start site region 88715
Tssr88716 9 35099108 to 35099119 11 - TSS region transcription start site region 88716
Cpgi21550 9 35116253 to 35117281 1028 CpG island CpG island 21550
4930581F22Rik 9 35116728 to 35130922 14194 + lncRNA gene RIKEN cDNA 4930581F22 gene
Tssr84325 9 35116740 to 35116767 27 + TSS region transcription start site region 84325
Tssr88717 9 35116760 to 35116793 33 - TSS region transcription start site region 88717
Tssr88718 9 35116804 to 35116891 87 - TSS region transcription start site region 88718
Tssr84326 9 35116930 to 35116946 16 + TSS region transcription start site region 84326
Tssr88719 9 35116975 to 35116986 11 - TSS region transcription start site region 88719
Tssr88720 9 35117694 to 35117757 63 - TSS region transcription start site region 88720
Tssr88721 9 35119135 to 35119144 9 - TSS region transcription start site region 88721
Tssr88722 9 35119190 to 35119212 22 - TSS region transcription start site region 88722
Dcps 9 35124414 to 35175987 51573 - protein coding gene decapping enzyme, scavenger
Tssr84327 9 35127865 to 35127876 11 + TSS region transcription start site region 84327
Gm24262 9 35144636 to 35144779 143 + snoRNA gene predicted gene, 24262