Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:3333592-3549236

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr83612 9 3335135 to 3335161 26 + TSS region transcription start site region 83612
Alkbh8 9 3335231 to 3391154 55923 + protein coding gene alkB homolog 8, tRNA methyltransferase
Tssr83613 9 3335470 to 3335501 31 + TSS region transcription start site region 83613
Tssr83614 9 3335508 to 3335531 23 + TSS region transcription start site region 83614
Gm24918 9 3352657 to 3352786 129 + snoRNA gene predicted gene, 24918
Tssr83615 9 3372522 to 3372525 3 + TSS region transcription start site region 83615
Gm23275 9 3395439 to 3395542 103 + snRNA gene predicted gene, 23275
Cwf19l2 9 3403592 to 3479236 75644 + protein coding gene CWF19-like 2, cell cycle control (S. pombe)
Cpgi21331 9 3403873 to 3404175 302 CpG island CpG island 21331
Tssr83616 9 3404039 to 3404050 11 + TSS region transcription start site region 83616
Tssr83617 9 3404058 to 3404098 40 + TSS region transcription start site region 83617
Tssr83618 9 3416966 to 3416997 31 + TSS region transcription start site region 83618
Gm5362 9 3494379 to 3497463 3084 - pseudogene predicted gene 5362
Gm40506 9 3529135 to 3532818 3683 - lncRNA gene predicted gene, 40506
Cpgi21332 9 3531680 to 3533239 1559 CpG island CpG island 21332
Tssr83619 9 3532295 to 3532354 59 + TSS region transcription start site region 83619
Tssr83620 9 3532360 to 3532448 88 + TSS region transcription start site region 83620
Gucy1a2 9 3532778 to 3894736 361958 + protein coding gene guanylate cyclase 1, soluble, alpha 2