Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:3303592-3579236

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr83612	9	3335135 to 3335161	26	+	TSS region	transcription start site region 83612
Alkbh8	9	3335231 to 3391154	55923	+	protein coding gene	alkB homolog 8, tRNA methyltransferase
Tssr83613	9	3335470 to 3335501	31	+	TSS region	transcription start site region 83613
Tssr83614	9	3335508 to 3335531	23	+	TSS region	transcription start site region 83614
Gm24918	9	3352657 to 3352786	129	+	snoRNA gene	predicted gene, 24918
Tssr83615	9	3372522 to 3372525	3	+	TSS region	transcription start site region 83615
Gm23275	9	3395439 to 3395542	103	+	snRNA gene	predicted gene, 23275
Cwf19l2	9	3403592 to 3479236	75644	+	protein coding gene	CWF19-like 2, cell cycle control (S. pombe)
Cpgi21331	9	3403873 to 3404175	302		CpG island	CpG island 21331
Tssr83616	9	3404039 to 3404050	11	+	TSS region	transcription start site region 83616
Tssr83617	9	3404058 to 3404098	40	+	TSS region	transcription start site region 83617
Tssr83618	9	3416966 to 3416997	31	+	TSS region	transcription start site region 83618
Gm5362	9	3494379 to 3497463	3084	-	pseudogene	predicted gene 5362
Gm40506	9	3529135 to 3532818	3683	-	lncRNA gene	predicted gene, 40506
Cpgi21332	9	3531680 to 3533239	1559		CpG island	CpG island 21332
Tssr83619	9	3532295 to 3532354	59	+	TSS region	transcription start site region 83619
Tssr83620	9	3532360 to 3532448	88	+	TSS region	transcription start site region 83620
Gucy1a2	9	3532778 to 3894736	361958	+	protein coding gene	guanylate cyclase 1, soluble, alpha 2