Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:32646244-33958803

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93 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ets1 9 32636221 to 32757820 121599 + protein coding gene E26 avian leukemia oncogene 1, 5' domain
Tssr84265 9 32652465 to 32652485 20 + TSS region transcription start site region 84265
Tssr84266 9 32652502 to 32652510 8 + TSS region transcription start site region 84266
Cpgi21543 9 32672132 to 32672346 214 CpG island CpG island 21543
Tssr84267 9 32679745 to 32679755 10 + TSS region transcription start site region 84267
Tssr84268 9 32679766 to 32679782 16 + TSS region transcription start site region 84268
Tssr84269 9 32681458 to 32681461 3 + TSS region transcription start site region 84269
Cpgi21544 9 32695478 to 32696544 1066 CpG island CpG island 21544
Tssr84270 9 32695678 to 32695686 8 + TSS region transcription start site region 84270
Tssr84271 9 32695692 to 32695705 13 + TSS region transcription start site region 84271
Tssr84272 9 32695715 to 32695719 4 + TSS region transcription start site region 84272
Tssr84273 9 32695751 to 32695775 24 + TSS region transcription start site region 84273
Tssr84274 9 32695806 to 32695816 10 + TSS region transcription start site region 84274
Tssr84275 9 32696005 to 32696095 90 + TSS region transcription start site region 84275
Tssr84276 9 32696865 to 32696876 11 + TSS region transcription start site region 84276
Tssr84277 9 32696986 to 32697011 25 + TSS region transcription start site region 84277
Tssr84278 9 32697927 to 32697939 12 + TSS region transcription start site region 84278
Tssr84279 9 32698247 to 32698274 27 + TSS region transcription start site region 84279
Tssr84280 9 32699410 to 32699423 13 + TSS region transcription start site region 84280
Tssr84281 9 32699811 to 32699821 10 + TSS region transcription start site region 84281
Tssr84282 9 32699890 to 32699897 7 + TSS region transcription start site region 84282
Tssr84283 9 32700270 to 32700298 28 + TSS region transcription start site region 84283
Tssr88691 9 32701187 to 32701192 5 - TSS region transcription start site region 88691
Tssr84284 9 32701292 to 32701312 20 + TSS region transcription start site region 84284
Tssr88692 9 32702878 to 32702894 16 - TSS region transcription start site region 88692
Tssr84285 9 32704174 to 32704185 11 + TSS region transcription start site region 84285
Tssr84286 9 32705129 to 32705135 6 + TSS region transcription start site region 84286
Tssr88693 9 32706328 to 32706350 22 - TSS region transcription start site region 88693
Gm27240 9 32709652 to 32711171 1519 - antisense lncRNA gene predicted gene 27240
Tssr84287 9 32716759 to 32716761 2 + TSS region transcription start site region 84287
Tssr88694 9 32718108 to 32718113 5 - TSS region transcription start site region 88694
Tssr84288 9 32723386 to 32723391 5 + TSS region transcription start site region 84288
Tssr84289 9 32726745 to 32726750 5 + TSS region transcription start site region 84289
Tssr84290 9 32728560 to 32728595 35 + TSS region transcription start site region 84290
Tssr84291 9 32728601 to 32728608 7 + TSS region transcription start site region 84291
Tssr88695 9 32731926 to 32731937 11 - TSS region transcription start site region 88695
Tssr84292 9 32732147 to 32732165 18 + TSS region transcription start site region 84292
Tssr84293 9 32732185 to 32732193 8 + TSS region transcription start site region 84293
Tssr84294 9 32737725 to 32737730 5 + TSS region transcription start site region 84294
Tssr84295 9 32740034 to 32740038 4 + TSS region transcription start site region 84295
Tssr84296 9 32743940 to 32743949 9 + TSS region transcription start site region 84296
Tssr84297 9 32745307 to 32745310 3 + TSS region transcription start site region 84297
Tssr84298 9 32745383 to 32745416 33 + TSS region transcription start site region 84298
Tssr88696 9 32747599 to 32747612 13 - TSS region transcription start site region 88696
Tssr84299 9 32747926 to 32747943 17 + TSS region transcription start site region 84299
Tssr84300 9 32752851 to 32752860 9 + TSS region transcription start site region 84300
Tssr84301 9 32754457 to 32754461 4 + TSS region transcription start site region 84301
Tssr84302 9 32754646 to 32754650 4 + TSS region transcription start site region 84302
Tssr84303 9 32754760 to 32754766 6 + TSS region transcription start site region 84303
Gm3331 9 32813734 to 32834104 20370 + lincRNA gene predicted gene 3331
Adq1 9 32838331 to 32838331 0 QTL aortic diameter QTL 1
Adq2 9 32838331 to 32838331 0 QTL aortic diameter QTL 2
Pdcc3 9 32838331 to 32838331 0 QTL plasmacytoid dentritic cell compartment 3
Gm37167 9 32839527 to 32839922 395 - unclassified gene predicted gene, 37167
Tssr88697 9 32901446 to 32901452 6 - TSS region transcription start site region 88697
Gm27162 9 32904937 to 32928966 24029 - lincRNA gene predicted gene 27162
Tssr84304 9 32906557 to 32906568 11 + TSS region transcription start site region 84304
Tssr84305 9 32906589 to 32906598 9 + TSS region transcription start site region 84305
Tssr84306 9 32910922 to 32910933 11 + TSS region transcription start site region 84306
Tssr84307 9 32913059 to 32913066 7 + TSS region transcription start site region 84307
Tssr88698 9 32915633 to 32915639 6 - TSS region transcription start site region 88698
Tssr88699 9 32915655 to 32915668 13 - TSS region transcription start site region 88699
Tssr84308 9 32915971 to 32916003 32 + TSS region transcription start site region 84308
Tssr88700 9 32924484 to 32924515 31 - TSS region transcription start site region 88700
Tssr84309 9 32926400 to 32926420 20 + TSS region transcription start site region 84309
Tssr84310 9 32926511 to 32926525 14 + TSS region transcription start site region 84310
Tssr84311 9 32926605 to 32926620 15 + TSS region transcription start site region 84311
Tssr88701 9 32928329 to 32928354 25 - TSS region transcription start site region 88701
Tssr84312 9 32928714 to 32928720 6 + TSS region transcription start site region 84312
Tssr88702 9 32928928 to 32928932 4 - TSS region transcription start site region 88702
Tssr88703 9 32959605 to 32959613 8 - TSS region transcription start site region 88703
Tssr84313 9 32963053 to 32963079 26 + TSS region transcription start site region 84313
Gm37192 9 32971037 to 32972384 1347 + unclassified gene predicted gene, 37192
Gm27166 9 33031791 to 33090799 59008 + lincRNA gene predicted gene 27166
V125Dq7 9 33100000 to 33100000 0 QTL vitamin D active form serum level QTL 7
V125Dq8 9 33100000 to 33100000 0 QTL vitamin D active form serum level QTL 8
Gm37758 9 33160062 to 33160690 628 - unclassified gene predicted gene, 37758
Gm32171 9 33254462 to 33262518 8056 + lincRNA gene predicted gene, 32171
Gm47775 9 33296244 to 33308803 12559 + lincRNA gene predicted gene, 47775
Cpgi21545 9 33359998 to 33360156 158 CpG island CpG island 21545
Gm47777 9 33482183 to 33492014 9831 - lincRNA gene predicted gene, 47777
Gm47778 9 33597365 to 33600468 3103 + lincRNA gene predicted gene, 47778
Tssr84314 9 33728157 to 33728159 2 + TSS region transcription start site region 84314
Tmed2b 9 33728165 to 33729412 1247 + protein coding gene transmembrane p24 trafficking protein 2B
Gm10698 9 33728247 to 33728850 603 + pseudogene predicted gene 10698
Tssr84315 9 33728400 to 33728419 19 + TSS region transcription start site region 84315
Hdlq109 9 33798345 to 33798345 0 QTL HDL QTL 109
Gm47784 9 33861203 to 33864019 2816 + lincRNA gene predicted gene, 47784
Tssr2819 9 33867941 to 33867945 4 + TSS region transcription start site region 2819
Gm47785 9 33901917 to 33921449 19532 + lincRNA gene predicted gene, 47785
Gm25439 9 33917492 to 33917622 130 + snoRNA gene predicted gene, 25439
Gm27165 9 33931644 to 33931875 231 + pseudogene predicted gene 27165
Gm27164 9 33942310 to 34007173 64863 + lincRNA gene predicted gene 27164