Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:31170525-31390566

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aplp2 9 31149557 to 31211815 62258 - protein coding gene amyloid beta (A4) precursor-like protein 2
Tssr88640 9 31170531 to 31170539 8 - TSS region transcription start site region 88640
Tssr88641 9 31170543 to 31170559 16 - TSS region transcription start site region 88641
Tssr88642 9 31170568 to 31170582 14 - TSS region transcription start site region 88642
Tssr88643 9 31170607 to 31170622 15 - TSS region transcription start site region 88643
Gm33535 9 31177148 to 31177895 747 - pseudogene predicted gene, 33535
Tssr88644 9 31209609 to 31209614 5 - TSS region transcription start site region 88644
Cpgi21527 9 31210760 to 31212549 1789 CpG island CpG island 21527
Tssr84218 9 31211334 to 31211367 33 + TSS region transcription start site region 84218
Tssr88645 9 31211805 to 31211824 19 - TSS region transcription start site region 88645
Tssr84219 9 31252606 to 31252619 13 + TSS region transcription start site region 84219
Gm7244 9 31274821 to 31275275 454 + pseudogene predicted gene 7244
Gm8154 9 31278020 to 31281723 3703 unclassified gene predicted gene 8154
4930517E14Rik 9 31278021 to 31280992 2971 - lincRNA gene Riken cDNA 4930517E14 gene
Tssr88646 9 31279892 to 31279905 13 - TSS region transcription start site region 88646
Cpgi21528 9 31279958 to 31281668 1710 CpG island CpG island 21528
Tssr88647 9 31280151 to 31280184 33 - TSS region transcription start site region 88647
Tssr84220 9 31280525 to 31280566 41 + TSS region transcription start site region 84220
Prdm10 9 31280538 to 31381723 101185 + protein coding gene PR domain containing 10
Gm10910 9 31280669 to 31281727 1058 + protein coding gene predicted gene 10910
Tssr84221 9 31280925 to 31280934 9 + TSS region transcription start site region 84221
Tssr84222 9 31281225 to 31281269 44 + TSS region transcription start site region 84222
Tssr84223 9 31354316 to 31354340 24 + TSS region transcription start site region 84223
D9Mit188 9 31360262 to 31360395 133 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 188
Elnv 9 31360262 to 37395074 6034812 QTL epilepsy naive
4932433N03Rik 9 31379073 to 31381727 2654 unclassified gene RIKEN cDNA 4932433N03 gene
1700023A20Rik 9 31385003 to 31386107 1104 unclassified gene RIKEN cDNA 1700023A20 gene
Cpgi21529 9 31385597 to 31386843 1246 CpG island CpG island 21529
Tssr84224 9 31386187 to 31386235 48 + TSS region transcription start site region 84224
Nfrkb 9 31386192 to 31421333 35141 + protein coding gene nuclear factor related to kappa B binding protein