Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:2980091-3020120

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi21317 9 3000026 to 3001102 1076 CpG island CpG island 21317
Tssr83553 9 3000035 to 3000062 27 + TSS region transcription start site region 83553
Tssr83554 9 3000091 to 3000120 29 + TSS region transcription start site region 83554
Tssr83555 9 3000134 to 3000163 29 + TSS region transcription start site region 83555
Tssr83556 9 3000190 to 3000216 26 + TSS region transcription start site region 83556
Tssr88007 9 3000218 to 3000238 20 - TSS region transcription start site region 88007
Gm26870 9 3000282 to 3038313 38031 - lincRNA gene predicted gene, 26870
Gm10722 9 3000922 to 3002330 1408 + protein coding gene predicted gene 10722
Cpgi21318 9 3002110 to 3002315 205 CpG island CpG island 21318
Tssr83557 9 3002328 to 3002361 33 + TSS region transcription start site region 83557
Tssr88008 9 3002364 to 3002386 22 - TSS region transcription start site region 88008
Tssr83558 9 3002478 to 3002500 22 + TSS region transcription start site region 83558
Tssr83559 9 3002960 to 3002984 24 + TSS region transcription start site region 83559
Tssr88009 9 3002991 to 3003011 20 - TSS region transcription start site region 88009
Gm11168 9 3003346 to 3006948 3602 + protein coding gene predicted gene 11168
Tssr83560 9 3004490 to 3004523 33 + TSS region transcription start site region 83560
Cpgi21319 9 3004503 to 3004840 337 CpG island CpG island 21319
Tssr83561 9 3004794 to 3004817 23 + TSS region transcription start site region 83561
Tssr88010 9 3004821 to 3004841 20 - TSS region transcription start site region 88010
Tssr83562 9 3005125 to 3005137 12 + TSS region transcription start site region 83562
Tssr83563 9 3005620 to 3005636 16 + TSS region transcription start site region 83563
Tssr83564 9 3005917 to 3005928 11 + TSS region transcription start site region 83564
Tssr83565 9 3007410 to 3007440 30 + TSS region transcription start site region 83565
Gm10721 9 3013140 to 3014344 1204 + protein coding gene predicted gene 10721
Tssr83566 9 3015269 to 3015302 33 + TSS region transcription start site region 83566
Gm10720 9 3015654 to 3017210 1556 + protein coding gene predicted gene 10720
Tssr83567 9 3015698 to 3015722 24 + TSS region transcription start site region 83567
Tssr88011 9 3015726 to 3015745 19 - TSS region transcription start site region 88011
Cpgi21320 9 3016068 to 3016355 287 CpG island CpG island 21320
Tssr83568 9 3016320 to 3016336 16 + TSS region transcription start site region 83568
Tssr83569 9 3016878 to 3016900 22 + TSS region transcription start site region 83569
Tssr88012 9 3016905 to 3016926 21 - TSS region transcription start site region 88012
Gm10719 9 3017408 to 3021593 4185 + protein coding gene predicted gene 10719
Tssr83570 9 3017525 to 3017543 18 + TSS region transcription start site region 83570
Tssr83571 9 3018760 to 3018779 19 + TSS region transcription start site region 83571
Cpgi21321 9 3018766 to 3019491 725 CpG island CpG island 21321
Tssr83572 9 3018961 to 3018980 19 + TSS region transcription start site region 83572
Tssr88013 9 3018988 to 3019010 22 - TSS region transcription start site region 88013