Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:28610495-29230514

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Opcml 9 27790775 to 28925410 1134635 + protein coding gene opioid binding protein/cell adhesion molecule-like
Tssr84185 9 28645850 to 28645853 3 + TSS region transcription start site region 84185
Tssr84186 9 28674995 to 28675001 6 + TSS region transcription start site region 84186
Tssr84187 9 28781186 to 28781190 4 + TSS region transcription start site region 84187
Gm48091 9 28794296 to 28954347 160051 - antisense lncRNA gene predicted gene, 48091
D9Mit324 9 28819187 to 28819432 245 DNA segment DNA Segment, Chr 9 Massachusetts Institute of Technology 324
Tssr84188 9 28920400 to 28920411 11 + TSS region transcription start site region 84188
Tssr84189 9 28920413 to 28920418 5 + TSS region transcription start site region 84189
Tssr84190 9 28920420 to 28920454 34 + TSS region transcription start site region 84190
Tssr84191 9 28920456 to 28920459 3 + TSS region transcription start site region 84191
Tssr84192 9 28920474 to 28920482 8 + TSS region transcription start site region 84192
Tssr84193 9 28920495 to 28920514 19 + TSS region transcription start site region 84193
Tssr84194 9 28920975 to 28920989 14 + TSS region transcription start site region 84194
Tssr84195 9 28921000 to 28921008 8 + TSS region transcription start site region 84195
Tssr84196 9 28921088 to 28921095 7 + TSS region transcription start site region 84196
Tssr84197 9 28921116 to 28921121 5 + TSS region transcription start site region 84197
Tssr84198 9 28944371 to 28944375 4 + TSS region transcription start site region 84198
D9Mit296 9 28945569 to 28945693 124 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology 296
Ntm 9 28994750 to 29963141 968391 - protein coding gene neurotrimin
Tssr88576 9 28994786 to 28994797 11 - TSS region transcription start site region 88576
Tssr88577 9 28996054 to 28996064 10 - TSS region transcription start site region 88577
Tssr88578 9 28996065 to 28996096 31 - TSS region transcription start site region 88578
Tssr88579 9 28996097 to 28996112 15 - TSS region transcription start site region 88579
Tssr88580 9 28996206 to 28996223 17 - TSS region transcription start site region 88580
Tssr88581 9 28996279 to 28996288 9 - TSS region transcription start site region 88581
Tssr88582 9 28996392 to 28996397 5 - TSS region transcription start site region 88582
Tssr88583 9 28996500 to 28996515 15 - TSS region transcription start site region 88583
Tssr84199 9 29014045 to 29014066 21 + TSS region transcription start site region 84199
Cpgi21518 9 29014095 to 29014284 189 CpG island CpG island 21518
Gm15520 9 29059799 to 29070199 10400 + antisense lncRNA gene predicted gene 15520
Tssr88584 9 29179086 to 29179093 7 - TSS region transcription start site region 88584