Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:27695439-28675464

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm18656 9 27776996 to 27777557 561 + pseudogene predicted gene, 18656
Gm39314 9 27784458 to 27791069 6611 - lncRNA gene predicted gene, 39314
Opcml 9 27790775 to 28925410 1134635 + protein coding gene opioid binding protein/cell adhesion molecule-like
Tssr84171 9 27790973 to 27790976 3 + TSS region transcription start site region 84171
Tssr84172 9 27790978 to 27790991 13 + TSS region transcription start site region 84172
Tssr84173 9 27790992 to 27791003 11 + TSS region transcription start site region 84173
Tssr84174 9 27791196 to 27791207 11 + TSS region transcription start site region 84174
Cpgi21516 9 27791210 to 27791863 653 CpG island CpG island 21516
Tssr84175 9 27791276 to 27791336 60 + TSS region transcription start site region 84175
Gdap8 9 27866118 to 27866489 371 unclassified gene ganglioside-induced differentiation-associated-protein 8
B230219J02Rik 9 27991146 to 27992073 927 unclassified non-coding RNA gene RIKEN cDNA B230219J02 gene
Gm33456 9 28020489 to 28021138 649 - pseudogene predicted gene, 33456
Tssr84176 9 28148281 to 28148284 3 + TSS region transcription start site region 84176
Tssr84177 9 28185439 to 28185464 25 + TSS region transcription start site region 84177
Gm15606 9 28197887 to 28199521 1634 + sense intronic lncRNA gene predicted gene 15606
Tssr84178 9 28256985 to 28256989 4 + TSS region transcription start site region 84178
Gm44316 9 28292748 to 28292844 96 + miRNA gene predicted gene, 44316
Gm39313 9 28364421 to 28402525 38104 - lncRNA gene predicted gene, 39313
Cpgi21517 9 28402854 to 28403954 1100 CpG island CpG island 21517
Tssr84179 9 28403295 to 28403339 44 + TSS region transcription start site region 84179
Tssr84180 9 28403480 to 28403496 16 + TSS region transcription start site region 84180
Tssr84181 9 28403513 to 28403536 23 + TSS region transcription start site region 84181
Tssr84182 9 28403538 to 28403552 14 + TSS region transcription start site region 84182
Tssr84183 9 28459982 to 28459987 5 + TSS region transcription start site region 84183
Tssr84184 9 28511022 to 28511034 12 + TSS region transcription start site region 84184
D9Mit63 9 28555677 to 28555778 101 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 63
Obq5 9 28592037 to 41888030 13295993 QTL obesity QTL 5
D9Mit65 9 28592037 to 28592161 124 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 65
D9Mit64 9 28592039 to 28592228 189 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 64
Tssr84185 9 28645850 to 28645853 3 + TSS region transcription start site region 84185
Tssr84186 9 28674995 to 28675001 6 + TSS region transcription start site region 84186