Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:26875175-27250315

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm1110 9 26879567 to 26923111 43544 - protein coding gene predicted gene 1110
Tssr84157 9 26879677 to 26879682 5 + TSS region transcription start site region 84157
Tssr88554 9 26880572 to 26880574 2 - TSS region transcription start site region 88554
Tssr88555 9 26889085 to 26889087 2 - TSS region transcription start site region 88555
Tssr88556 9 26896994 to 26896997 3 - TSS region transcription start site region 88556
Tssr88557 9 26911815 to 26911819 4 - TSS region transcription start site region 88557
Tssr88558 9 26917188 to 26917191 3 - TSS region transcription start site region 88558
Tssr88559 9 26920090 to 26920096 6 - TSS region transcription start site region 88559
Tssr88560 9 26920875 to 26920880 5 - TSS region transcription start site region 88560
Tssr88561 9 26923040 to 26923051 11 - TSS region transcription start site region 88561
Tssr88562 9 26923060 to 26923086 26 - TSS region transcription start site region 88562
Tssr88563 9 26923092 to 26923095 3 - TSS region transcription start site region 88563
Tssr88564 9 26923133 to 26923148 15 - TSS region transcription start site region 88564
Tssr2813 9 26923192 to 26923196 4 - TSS region transcription start site region 2813
Tssr88565 9 26924186 to 26924195 9 - TSS region transcription start site region 88565
Tssr84158 9 26924460 to 26924500 40 + TSS region transcription start site region 84158
Gm5120 9 26960149 to 26962559 2410 - pseudogene predicted gene 5120
Acad8 9 26974138 to 26999551 25413 - protein coding gene acyl-Coenzyme A dehydrogenase family, member 8
Tssr88566 9 26977853 to 26977861 8 - TSS region transcription start site region 88566
Tssr88567 9 26977903 to 26977909 6 - TSS region transcription start site region 88567
Cpgi21512 9 26999071 to 26999734 663 CpG island CpG island 21512
Bglu19 9 26999472 to 26999472 0 QTL blood glucose level 19
Tssr88568 9 26999491 to 26999557 66 - TSS region transcription start site region 88568
Tssr84159 9 26999668 to 26999686 18 + TSS region transcription start site region 84159
Tssr84160 9 26999699 to 26999733 34 + TSS region transcription start site region 84160
Thyn1 9 26999710 to 27007336 7626 + protein coding gene thymocyte nuclear protein 1
Vps26b 9 27007771 to 27030065 22294 - protein coding gene VPS26 retromer complex component B
Gm48673 9 27021553 to 27024921 3368 - unclassified gene predicted gene, 48673
Cpgi21513 9 27029107 to 27031049 1942 CpG island CpG island 21513
Tssr88569 9 27029988 to 27030004 16 - TSS region transcription start site region 88569
Tssr88570 9 27030010 to 27030114 104 - TSS region transcription start site region 88570
Tssr84161 9 27030159 to 27030197 38 + TSS region transcription start site region 84161
Ncapd3 9 27030175 to 27095315 65140 + protein coding gene non-SMC condensin II complex, subunit D3
Tssr84162 9 27030718 to 27030772 54 + TSS region transcription start site region 84162
6720417O19Rik 9 27095942 to 27097356 1414 unclassified gene RIKEN cDNA 6720417O19 gene
Jam3 9 27097384 to 27155421 58037 - protein coding gene junction adhesion molecule 3
Gm48796 9 27098551 to 27102343 3792 + antisense lncRNA gene predicted gene, 48796
Gm46105 9 27143012 to 27148675 5663 - lncRNA gene predicted gene, 46105
Cpgi21514 9 27154825 to 27155677 852 CpG island CpG island 21514
Tssr88571 9 27155368 to 27155387 19 - TSS region transcription start site region 88571
Tssr88572 9 27155389 to 27155416 27 - TSS region transcription start site region 88572
Tssr88573 9 27155418 to 27155425 7 - TSS region transcription start site region 88573
Tssr88574 9 27187004 to 27187012 8 - TSS region transcription start site region 88574
Tssr84163 9 27191737 to 27191738 1 + TSS region transcription start site region 84163
Gm48801 9 27199590 to 27203298 3708 - lincRNA gene predicted gene, 48801