Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:25197878-25307900

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30066 9 25181181 to 25202821 21640 + lncRNA gene predicted gene, 30066
Tssr88527 9 25211062 to 25211075 13 - TSS region transcription start site region 88527
Gm8031 9 25228447 to 25229069 622 - pseudogene predicted gene 8031
Gm29642 9 25240486 to 25245580 5094 + lincRNA gene predicted gene 29642
9130004C02Rik 9 25248127 to 25252416 4289 unclassified gene RIKEN cDNA 9130004C02 gene
Cpgi21506 9 25251672 to 25253513 1841 CpG island CpG island 21506
Tssr88528 9 25251984 to 25251997 13 - TSS region transcription start site region 88528
Tssr88529 9 25252022 to 25252084 62 - TSS region transcription start site region 88529
Tssr84122 9 25252200 to 25252233 33 + TSS region transcription start site region 84122
Tssr88530 9 25252371 to 25252387 16 - TSS region transcription start site region 88530
Tssr88531 9 25252397 to 25252415 18 - TSS region transcription start site region 88531
Sept7 9 25252439 to 25308571 56132 + protein coding gene septin 7
Tssr84123 9 25252505 to 25252516 11 + TSS region transcription start site region 84123
Tssr84124 9 25252589 to 25252591 2 + TSS region transcription start site region 84124
Tssr84125 9 25252638 to 25252659 21 + TSS region transcription start site region 84125
Tssr84126 9 25252878 to 25252900 22 + TSS region transcription start site region 84126
Tssr84127 9 25252910 to 25252930 20 + TSS region transcription start site region 84127
Tssr84128 9 25253754 to 25253769 15 + TSS region transcription start site region 84128
Tssr84129 9 25255255 to 25255280 25 + TSS region transcription start site region 84129
A1300008O04Rik 9 25259455 to 25262656 3201 unclassified gene RIKEN cDNA A1300008O04 gene
Tssr84130 9 25263177 to 25263190 13 + TSS region transcription start site region 84130
Tssr2810 9 25263207 to 25263220 13 + TSS region transcription start site region 2810
Tssr84131 9 25265407 to 25265433 26 + TSS region transcription start site region 84131
Gm48272 9 25274802 to 25275475 673 - pseudogene predicted gene, 48272
Tssr84132 9 25277552 to 25277614 62 + TSS region transcription start site region 84132
Tssr84133 9 25288244 to 25288265 21 + TSS region transcription start site region 84133
Tssr84134 9 25288272 to 25288294 22 + TSS region transcription start site region 84134
Tssr84135 9 25293676 to 25293767 91 + TSS region transcription start site region 84135
Tssr84136 9 25297802 to 25297826 24 + TSS region transcription start site region 84136
Tssr84137 9 25297827 to 25297846 19 + TSS region transcription start site region 84137
Tssr84138 9 25297875 to 25297883 8 + TSS region transcription start site region 84138
Tssr84139 9 25299480 to 25299519 39 + TSS region transcription start site region 84139
Tssr84140 9 25301465 to 25301478 13 + TSS region transcription start site region 84140
Tssr84141 9 25303733 to 25303766 33 + TSS region transcription start site region 84141
Tssr84142 9 25306179 to 25306198 19 + TSS region transcription start site region 84142
Tssr84143 9 25307791 to 25307800 9 + TSS region transcription start site region 84143