Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:24731971-25140079

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tbx20 9 24720812 to 24774303 53491 - protein coding gene T-box 20
Tssr88513 9 24745331 to 24745332 1 - TSS region transcription start site region 88513
Tssr88514 9 24765444 to 24765449 5 - TSS region transcription start site region 88514
Cpgi21500 9 24770086 to 24770929 843 CpG island CpG island 21500
Tssr88515 9 24773178 to 24773182 4 - TSS region transcription start site region 88515
Cpgi21501 9 24773699 to 24774744 1045 CpG island CpG island 21501
Tssr88516 9 24774276 to 24774291 15 - TSS region transcription start site region 88516
Gm29824 9 24775724 to 24795894 20170 + lincRNA gene predicted gene, 29824
Cpgi21502 9 24777324 to 24778167 843 CpG island CpG island 21502
Cpgi21503 9 24780745 to 24781481 736 CpG island CpG island 21503
Amd-ps6 9 24826343 to 24827345 1002 - pseudogene S-adenosylmethionine decarboxylase, pseudogene 6
D9Mit222.1 9 24893793 to 24893912 119 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 222.1
D9Mit222 9 24893905 to 24894055 150 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 222
Tssr2809 9 24896853 to 24896854 1 + TSS region transcription start site region 2809
Gm40509 9 24926971 to 24945079 18108 - lncRNA gene predicted gene, 40509
Cpgi21504 9 24952593 to 24952794 201 CpG island CpG island 21504
Gm48255 9 24952973 to 24953299 326 + pseudogene predicted gene, 48255
Gm18377 9 24957580 to 24958135 555 - pseudogene predicted gene, 18377
Gm23893 9 24964536 to 24964669 133 + snoRNA gene predicted gene, 23893
E130101E03Rik 9 24974201 to 24990874 16673 + lincRNA gene RIKEN cDNA E130101E03 gene
Bmiq8 9 25000000 to 69000000 44000000 QTL body mass index QTL 8
Gm48256 9 25057050 to 25062599 5549 + lincRNA gene predicted gene, 48256
Gm10181 9 25089422 to 25089490 68 + protein coding gene predicted gene 10181
Gm10180 9 25101404 to 25101481 77 - pseudogene predicted gene 10180
Tssr88517 9 25101516 to 25101520 4 - TSS region transcription start site region 88517
Herpud2 9 25108128 to 25151781 43653 - protein coding gene HERPUD family member 2