Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:23079147-24519155

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36743 9 22996434 to 23147606 151172 + lncRNA gene predicted gene, 36743
Cpgi21493 9 23083694 to 23083890 196 CpG island CpG island 21493
D9Mit126 9 23156393 to 23156518 125 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 126
Cpgi21494 9 23222190 to 23224002 1812 CpG island CpG island 21494
Tssr84105 9 23222714 to 23222720 6 + TSS region transcription start site region 84105
Bmper 9 23223076 to 23485200 262124 + protein coding gene BMP-binding endothelial regulator
Tssr84106 9 23223509 to 23223601 92 + TSS region transcription start site region 84106
Tssr84107 9 23223608 to 23223621 13 + TSS region transcription start site region 84107
Cpgi21495 9 23254380 to 23254748 368 CpG island CpG island 21495
Tssr84108 9 23306709 to 23306717 8 + TSS region transcription start site region 84108
Tssr84109 9 23401011 to 23401013 2 + TSS region transcription start site region 84109
D9Mit363 9 23487644 to 23487770 126 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology-363
Gm39311 9 23581274 to 23587205 5931 + lncRNA gene predicted gene, 39311
4930539C01Rik 9 23749901 to 23750307 406 unclassified gene RIKEN cDNA 4930539C01 gene
Gm3011 9 23776492 to 23777073 581 + pseudogene predicted gene 3011
D9Mit85 9 23792328 to 23792446 118 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 85
Tssr84110 9 23799147 to 23799155 8 + TSS region transcription start site region 84110
Gm47638 9 23876783 to 23877160 377 + pseudogene predicted gene, 47638
Gm3028 9 23903900 to 23904998 1098 + pseudogene predicted gene 3028
Gm47663 9 23917102 to 23940342 23240 - lincRNA gene predicted gene, 47663
Gm47668 9 24017894 to 24018159 265 - pseudogene predicted gene, 47668
Gm47670 9 24091643 to 24091902 259 - pseudogene predicted gene, 47670
Npsr1 9 24097996 to 24316398 218402 + protein coding gene neuropeptide S receptor 1
Gm47674 9 24284873 to 24287841 2968 - unclassified gene predicted gene, 47674
Gm15600 9 24296139 to 24300257 4118 - antisense lncRNA gene predicted gene 15600
Cpgi21496 9 24302069 to 24302491 422 CpG island CpG island 21496
Tssr88501 9 24314819 to 24314822 3 - TSS region transcription start site region 88501
Tssr84111 9 24341653 to 24341663 10 + TSS region transcription start site region 84111
Gm10701 9 24341657 to 24418709 77052 + antisense lncRNA gene predicted gene 10701
Tssr84112 9 24341716 to 24341719 3 + TSS region transcription start site region 84112
Gm22380 9 24351118 to 24351212 94 + snoRNA gene predicted gene, 22380
Tssr84113 9 24368143 to 24368150 7 + TSS region transcription start site region 84113
Dpy19l1 9 24411776 to 24503140 91364 - protein coding gene dpy-19-like 1 (C. elegans)
Tssr88502 9 24412469 to 24412474 5 - TSS region transcription start site region 88502
Cpgi21497 9 24502443 to 24503818 1375 CpG island CpG island 21497
Tssr88503 9 24503127 to 24503197 70 - TSS region transcription start site region 88503
Tssr88504 9 24503199 to 24503231 32 - TSS region transcription start site region 88504
Tssr88505 9 24503275 to 24503292 17 - TSS region transcription start site region 88505
Tssr88506 9 24503319 to 24503328 9 - TSS region transcription start site region 88506
Tssr88507 9 24503333 to 24503343 10 - TSS region transcription start site region 88507
Gm47772 9 24503449 to 24505585 2136 + bidirectional promoter lncRNA gene predicted gene, 47772
Tssr84114 9 24503497 to 24503512 15 + TSS region transcription start site region 84114