Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:22733076-23975200

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bbs9 9 22475715 to 22888280 412565 + protein coding gene Bardet-Biedl syndrome 9 (human)
Gm27639 9 22772751 to 22772835 84 - snRNA gene predicted gene, 27639
Tssr88500 9 22772821 to 22772848 27 - TSS region transcription start site region 88500
Gm39309 9 22791041 to 22805334 14293 - lncRNA gene predicted gene, 39309
Cpgi21491 9 22948813 to 22948999 186 CpG island CpG island 21491
Gm36685 9 22993549 to 22994557 1008 + lncRNA gene predicted gene, 36685
Gm36743 9 22996434 to 23147606 151172 + lncRNA gene predicted gene, 36743
Cpgi21492 9 23009554 to 23009815 261 CpG island CpG island 21492
Tssr2808 9 23026532 to 23026534 2 - TSS region transcription start site region 2808
Cpgi21493 9 23083694 to 23083890 196 CpG island CpG island 21493
D9Mit126 9 23156393 to 23156518 125 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 126
Cpgi21494 9 23222190 to 23224002 1812 CpG island CpG island 21494
Tssr84105 9 23222714 to 23222720 6 + TSS region transcription start site region 84105
Bmper 9 23223076 to 23485200 262124 + protein coding gene BMP-binding endothelial regulator
Tssr84106 9 23223509 to 23223601 92 + TSS region transcription start site region 84106
Tssr84107 9 23223608 to 23223621 13 + TSS region transcription start site region 84107
Cpgi21495 9 23254380 to 23254748 368 CpG island CpG island 21495
Tssr84108 9 23306709 to 23306717 8 + TSS region transcription start site region 84108
Tssr84109 9 23401011 to 23401013 2 + TSS region transcription start site region 84109
D9Mit363 9 23487644 to 23487770 126 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology-363
Gm39311 9 23581274 to 23587205 5931 + lncRNA gene predicted gene, 39311
4930539C01Rik 9 23749901 to 23750307 406 unclassified gene RIKEN cDNA 4930539C01 gene
Gm3011 9 23776492 to 23777073 581 + pseudogene predicted gene 3011
D9Mit85 9 23792328 to 23792446 118 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 85
Tssr84110 9 23799147 to 23799155 8 + TSS region transcription start site region 84110
Gm47638 9 23876783 to 23877160 377 + pseudogene predicted gene, 47638
Gm3028 9 23903900 to 23904998 1098 + pseudogene predicted gene 3028
Gm47663 9 23917102 to 23940342 23240 - lincRNA gene predicted gene, 47663