Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:22424554-23594815

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
9530077C05Rik 9 22411513 to 22444681 33168 + protein coding gene RIKEN cDNA 9530077C05 gene
4930554G03Rik 9 22435897 to 22436448 551 unclassified gene RIKEN cDNA 4930554G03 gene
Tssr88493 9 22445529 to 22445547 18 - TSS region transcription start site region 88493
Tssr88494 9 22445626 to 22445638 12 - TSS region transcription start site region 88494
Rp9 9 22448311 to 22468356 20045 - protein coding gene retinitis pigmentosa 9 (human)
Tssr84093 9 22448706 to 22448778 72 + TSS region transcription start site region 84093
Gm17545 9 22454290 to 22462062 7772 + protein coding gene predicted gene, 17545
Gm3556 9 22466820 to 22467981 1161 protein coding gene predicted gene 3556
Cpgi21489 9 22467371 to 22468650 1279 CpG island CpG island 21489
Tssr88495 9 22468229 to 22468246 17 - TSS region transcription start site region 88495
Tssr88496 9 22468254 to 22468277 23 - TSS region transcription start site region 88496
Tssr88497 9 22468283 to 22468292 9 - TSS region transcription start site region 88497
Tssr88498 9 22468294 to 22468383 89 - TSS region transcription start site region 88498
Cpgi21490 9 22475429 to 22475803 374 CpG island CpG island 21490
Tssr84094 9 22475691 to 22475756 65 + TSS region transcription start site region 84094
Bbs9 9 22475715 to 22888280 412565 + protein coding gene Bardet-Biedl syndrome 9 (human)
Tssr84095 9 22475773 to 22475786 13 + TSS region transcription start site region 84095
Tssr84096 9 22475813 to 22475858 45 + TSS region transcription start site region 84096
Tssr84097 9 22475872 to 22475889 17 + TSS region transcription start site region 84097
Gm2976 9 22479934 to 22480446 512 - pseudogene predicted gene 2976
Tssr88499 9 22486351 to 22486365 14 - TSS region transcription start site region 88499
Tssr84098 9 22643246 to 22643257 11 + TSS region transcription start site region 84098
Tssr84099 9 22643271 to 22643288 17 + TSS region transcription start site region 84099
Tssr84100 9 22655104 to 22655128 24 + TSS region transcription start site region 84100
Tssr84101 9 22655133 to 22655142 9 + TSS region transcription start site region 84101
Tssr84102 9 22655146 to 22655159 13 + TSS region transcription start site region 84102
Tssr84103 9 22655320 to 22655323 3 + TSS region transcription start site region 84103
Gm16165 9 22669737 to 22670516 779 - pseudogene predicted gene 16165
Gm16164 9 22677851 to 22678318 467 - pseudogene predicted gene 16164
Tssr84104 9 22678751 to 22678767 16 + TSS region transcription start site region 84104
Gm27639 9 22772751 to 22772835 84 - snRNA gene predicted gene, 27639
Tssr88500 9 22772821 to 22772848 27 - TSS region transcription start site region 88500
Gm39309 9 22791041 to 22805334 14293 - lncRNA gene predicted gene, 39309
Cpgi21491 9 22948813 to 22948999 186 CpG island CpG island 21491
Gm36685 9 22993549 to 22994557 1008 + lncRNA gene predicted gene, 36685
Gm36743 9 22996434 to 23147606 151172 + lncRNA gene predicted gene, 36743
Cpgi21492 9 23009554 to 23009815 261 CpG island CpG island 21492
Tssr2808 9 23026532 to 23026534 2 - TSS region transcription start site region 2808
Cpgi21493 9 23083694 to 23083890 196 CpG island CpG island 21493
D9Mit126 9 23156393 to 23156518 125 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 126
Cpgi21494 9 23222190 to 23224002 1812 CpG island CpG island 21494
Tssr84105 9 23222714 to 23222720 6 + TSS region transcription start site region 84105
Bmper 9 23223076 to 23485200 262124 + protein coding gene BMP-binding endothelial regulator
Tssr84106 9 23223509 to 23223601 92 + TSS region transcription start site region 84106
Tssr84107 9 23223608 to 23223621 13 + TSS region transcription start site region 84107
Cpgi21495 9 23254380 to 23254748 368 CpG island CpG island 21495
Tssr84108 9 23306709 to 23306717 8 + TSS region transcription start site region 84108
Tssr84109 9 23401011 to 23401013 2 + TSS region transcription start site region 84109
D9Mit363 9 23487644 to 23487770 126 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology-363
Gm39311 9 23581274 to 23587205 5931 + lncRNA gene predicted gene, 39311