Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:22189222-22400572

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp872 9 22188166 to 22202123 13957 + protein coding gene zinc finger protein 872
Tssr84082 9 22196778 to 22196783 5 + TSS region transcription start site region 84082
Gm18228 9 22204493 to 22205583 1090 + pseudogene predicted gene, 18228
1810064F22Rik 9 22206786 to 22213860 7074 - antisense lncRNA gene RIKEN cDNA 1810064F22 gene
Tssr88478 9 22213850 to 22213866 16 - TSS region transcription start site region 88478
Cpgi21483 9 22225533 to 22226136 603 CpG island CpG island 21483
Tssr84083 9 22225702 to 22225730 28 + TSS region transcription start site region 84083
Zfp809 9 22225714 to 22243354 17640 + protein coding gene zinc finger protein 809
Tssr84084 9 22225733 to 22225760 27 + TSS region transcription start site region 84084
Gm48478 9 22228978 to 22231302 2324 + unclassified gene predicted gene, 48478
Tssr84085 9 22239805 to 22239819 14 + TSS region transcription start site region 84085
Tssr88479 9 22240088 to 22240094 6 - TSS region transcription start site region 88479
Zfp599 9 22247430 to 22259895 12465 - protein coding gene zinc finger protein 599
Cpgi21484 9 22259407 to 22259953 546 CpG island CpG island 21484
Tssr88480 9 22259887 to 22259949 62 - TSS region transcription start site region 88480
Gm39307 9 22260343 to 22263286 2943 + bidirectional promoter lncRNA gene predicted gene, 39307
Gm39308 9 22273068 to 22275070 2002 - lncRNA gene predicted gene, 39308
Zfp810 9 22276748 to 22307648 30900 - protein coding gene zinc finger protein 810
Gm48627 9 22294222 to 22295572 1350 - unclassified gene predicted gene, 48627
Gm18225 9 22295946 to 22296687 741 - pseudogene predicted gene, 18225
Tssr88481 9 22298836 to 22298843 7 - TSS region transcription start site region 88481
Cpgi21485 9 22307162 to 22308062 900 CpG island CpG island 21485
Tssr88482 9 22307641 to 22307694 53 - TSS region transcription start site region 88482
Gm10182 9 22321105 to 22321377 272 - pseudogene predicted pseudogene 10182
Tssr88483 9 22321473 to 22321475 2 - TSS region transcription start site region 88483
Cpgi21486 9 22327643 to 22328231 588 CpG island CpG island 21486
Gm6607 9 22330173 to 22330500 327 - pseudogene predicted gene 6607
Anln 9 22332012 to 22389188 57176 - protein coding gene anillin, actin binding protein
Gm48646 9 22370552 to 22371779 1227 - sense intronic lncRNA gene predicted gene, 48646
Tssr88484 9 22376177 to 22376192 15 - TSS region transcription start site region 88484
Tssr88485 9 22376199 to 22376214 15 - TSS region transcription start site region 88485
Tssr88486 9 22376218 to 22376229 11 - TSS region transcription start site region 88486
Tssr88487 9 22376231 to 22376241 10 - TSS region transcription start site region 88487
Tssr88488 9 22376244 to 22376276 32 - TSS region transcription start site region 88488
Tssr88489 9 22376288 to 22376317 29 - TSS region transcription start site region 88489
Cpgi21487 9 22388420 to 22389589 1169 CpG island CpG island 21487
Tssr84086 9 22388868 to 22388890 22 + TSS region transcription start site region 84086
Tssr84087 9 22388902 to 22388950 48 + TSS region transcription start site region 84087
Tssr88490 9 22389086 to 22389099 13 - TSS region transcription start site region 88490
Tssr88491 9 22389113 to 22389196 83 - TSS region transcription start site region 88491
Tssr84088 9 22389268 to 22389316 48 + TSS region transcription start site region 84088
Tssr88492 9 22390480 to 22390510 30 - TSS region transcription start site region 88492