MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:22040411-22086376

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Elavl3	9	22015005 to 22052023	37018	-	protein coding gene	ELAV like RNA binding protein 3
Gm49318	9	22036380 to 22071259	34879	-	protein coding gene	predicted gene, 49318
Tssr88447	9	22046433 to 22046437	4	-	TSS region	transcription start site region 88447
Cpgi21472	9	22050113 to 22052364	2251		CpG island	CpG island 21472
Tssr88448	9	22051963 to 22051983	20	-	TSS region	transcription start site region 88448
Tssr88449	9	22052021 to 22052026	5	-	TSS region	transcription start site region 88449
Cpgi21473	9	22054504 to 22055177	673		CpG island	CpG island 21473
Zfp653	9	22055411 to 22071376	15965	-	protein coding gene	zinc finger protein 653
Cpgi21474	9	22055668 to 22056139	471		CpG island	CpG island 21474
Cpgi21475	9	22070536 to 22071597	1061		CpG island	CpG island 21475
Gm16845	9	22071002 to 22086122	15120	+	antisense lncRNA gene	predicted gene, 16845
Tssr84068	9	22071002 to 22071051	49	+	TSS region	transcription start site region 84068
Tssr88450	9	22071368 to 22071416	48	-	TSS region	transcription start site region 88450
Ecsit	9	22072246 to 22085438	13192	-	protein coding gene	ECSIT signalling integrator
Tssr88451	9	22076402 to 22076428	26	-	TSS region	transcription start site region 88451
Cpgi21476	9	22085013 to 22085763	750		CpG island	CpG island 21476
Tssr88452	9	22085056 to 22085085	29	-	TSS region	transcription start site region 88452
Tssr88453	9	22085380 to 22085389	9	-	TSS region	transcription start site region 88453
Tssr88454	9	22085391 to 22085443	52	-	TSS region	transcription start site region 88454