Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:21873111-21963158

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47873 9 21872274 to 21892189 19915 + pseudogene predicted gene, 47873
Rab3d 9 21907491 to 21918183 10692 - protein coding gene RAB3D, member RAS oncogene family
Cpgi21457 9 21917589 to 21918457 868 CpG island CpG island 21457
Tssr88421 9 21918111 to 21918158 47 - TSS region transcription start site region 88421
Tmem205 9 21921009 to 21927535 6526 - protein coding gene transmembrane protein 205
Tssr88422 9 21926360 to 21926386 26 - TSS region transcription start site region 88422
Cpgi21458 9 21927270 to 21927769 499 CpG island CpG island 21458
Tssr88423 9 21927336 to 21927385 49 - TSS region transcription start site region 88423
Ccdc159 9 21927471 to 21935872 8401 + protein coding gene coiled-coil domain containing 159
Tssr88424 9 21927515 to 21927563 48 - TSS region transcription start site region 88424
Tssr88425 9 21927565 to 21927576 11 - TSS region transcription start site region 88425
Tssr84054 9 21927594 to 21927646 52 + TSS region transcription start site region 84054
Tssr84055 9 21927658 to 21927669 11 + TSS region transcription start site region 84055
Tssr84056 9 21927685 to 21927697 12 + TSS region transcription start site region 84056
Cpgi21459 9 21936834 to 21937499 665 CpG island CpG island 21459
Tssr84057 9 21936986 to 21937070 84 + TSS region transcription start site region 84057
Plppr2 9 21937033 to 21948907 11874 + protein coding gene phospholipid phosphatase related 2
Tssr84058 9 21937075 to 21937098 23 + TSS region transcription start site region 84058
Cpgi21460 9 21943283 to 21943958 675 CpG island CpG island 21460
Cpgi21461 9 21944189 to 21944649 460 CpG island CpG island 21461
Cpgi21462 9 21947411 to 21947906 495 CpG island CpG island 21462
Gm45914 9 21955284 to 21956006 722 - lncRNA gene predicted gene, 45914
Cpgi21463 9 21955341 to 21956244 903 CpG island CpG island 21463
Tssr84059 9 21955747 to 21955769 22 + TSS region transcription start site region 84059
Swsap1 9 21955755 to 21958264 2509 + protein coding gene SWIM type zinc finger 7 associated protein 1
Tssr84060 9 21955771 to 21955799 28 + TSS region transcription start site region 84060
Epor 9 21958897 to 21963506 4609 - protein coding gene erythropoietin receptor
Cpgi21464 9 21960441 to 21960910 469 CpG island CpG island 21464
Cpgi21465 9 21961462 to 21962931 1469 CpG island CpG island 21465
Tssr2805 9 21962309 to 21962324 15 - TSS region transcription start site region 2805
Tssr88426 9 21962341 to 21962367 26 - TSS region transcription start site region 88426
Tssr88427 9 21962386 to 21962397 11 - TSS region transcription start site region 88427