Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:21627913-21728096

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Smarca4	9	21616169 to 21704230	88061	+	protein coding gene	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
Tssr84036	9	21632791 to 21632798	7	+	TSS region	transcription start site region 84036
Tssr84037	9	21632990 to 21633021	31	+	TSS region	transcription start site region 84037
Tssr88406	9	21635833 to 21635870	37	-	TSS region	transcription start site region 88406
Tssr84038	9	21637272 to 21637310	38	+	TSS region	transcription start site region 84038
Cpgi21449	9	21639247 to 21639398	151		CpG island	CpG island 21449
Tssr84039	9	21640945 to 21640961	16	+	TSS region	transcription start site region 84039
Tssr84040	9	21660577 to 21660594	17	+	TSS region	transcription start site region 84040
Tssr84041	9	21660610 to 21660620	10	+	TSS region	transcription start site region 84041
Tssr84042	9	21670100 to 21670140	40	+	TSS region	transcription start site region 84042
Gm27373	9	21677913 to 21678096	183	+	unclassified non-coding RNA gene	predicted gene, 27373
Tssr84043	9	21695621 to 21695625	4	+	TSS region	transcription start site region 84043
Gm26511	9	21717616 to 21723450	5834	-	lincRNA gene	predicted gene, 26511
Cpgi21450	9	21723139 to 21724441	1302		CpG island	CpG island 21450
Ldlr	9	21723576 to 21749919	26343	+	protein coding gene	low density lipoprotein receptor
Tssr84044	9	21723604 to 21723615	11	+	TSS region	transcription start site region 84044
Tssr84045	9	21723624 to 21723657	33	+	TSS region	transcription start site region 84045