Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:21558491-21618516

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Carm1 9 21546894 to 21589467 42573 + protein coding gene coactivator-associated arginine methyltransferase 1
Tssr84016 9 21568287 to 21568291 4 + TSS region transcription start site region 84016
Tssr84017 9 21587295 to 21587327 32 + TSS region transcription start site region 84017
Tssr84018 9 21588180 to 21588202 22 + TSS region transcription start site region 84018
Tssr84019 9 21588491 to 21588516 25 + TSS region transcription start site region 84019
Tssr84020 9 21588582 to 21588605 23 + TSS region transcription start site region 84020
Yipf2 9 21588682 to 21592828 4146 - protein coding gene Yip1 domain family, member 2
Tssr84021 9 21588895 to 21588910 15 + TSS region transcription start site region 84021
Tssr84022 9 21589203 to 21589221 18 + TSS region transcription start site region 84022
Tssr84023 9 21589228 to 21589244 16 + TSS region transcription start site region 84023
Cpgi21447 9 21592511 to 21593849 1338 CpG island CpG island 21447
Timm29 9 21592722 to 21595970 3248 + protein coding gene translocase of inner mitochondrial membrane 29
Tssr88402 9 21592733 to 21592795 62 - TSS region transcription start site region 88402
Tssr88403 9 21592805 to 21592846 41 - TSS region transcription start site region 88403
Tssr84024 9 21592885 to 21592898 13 + TSS region transcription start site region 84024
Tssr84025 9 21592905 to 21592963 58 + TSS region transcription start site region 84025
Gm7904 9 21607863 to 21608327 464 - pseudogene predicted gene 7904
D9Ertd12e 9 21608718 to 21608939 221 DNA segment DNA segment, Chr 9, ERATO Doi 12, expressed
Gm39304 9 21612366 to 21616094 3728 - lncRNA gene predicted gene, 39304
Mir1946b 9 21613444 to 21613576 132 - miRNA gene microRNA 1946b
Cpgi21448 9 21615644 to 21616890 1246 CpG island CpG island 21448
Tssr88404 9 21615862 to 21615879 17 - TSS region transcription start site region 88404
Tssr84026 9 21616128 to 21616147 19 + TSS region transcription start site region 84026
Tssr84027 9 21616152 to 21616163 11 + TSS region transcription start site region 84027
Tssr84028 9 21616166 to 21616177 11 + TSS region transcription start site region 84028
Smarca4 9 21616169 to 21704230 88061 + protein coding gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
Tssr84029 9 21616230 to 21616281 51 + TSS region transcription start site region 84029
Tssr84030 9 21616300 to 21616311 11 + TSS region transcription start site region 84030
Tssr84031 9 21616368 to 21616371 3 + TSS region transcription start site region 84031
Tssr88405 9 21616451 to 21616471 20 - TSS region transcription start site region 88405