MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:21331965-21371969

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Slc44a2	9	21320719 to 21355028	34309	+	protein coding gene	solute carrier family 44, member 2
Tssr83986	9	21337832 to 21337859	27	+	TSS region	transcription start site region 83986
Cpgi21441	9	21337869 to 21338095	226		CpG island	CpG island 21441
Tssr83987	9	21337870 to 21337877	7	+	TSS region	transcription start site region 83987
Tssr83988	9	21351965 to 21351969	4	+	TSS region	transcription start site region 83988
Tssr88396	9	21359424 to 21359426	2	-	TSS region	transcription start site region 88396
Cpgi21442	9	21367175 to 21368577	1402		CpG island	CpG island 21442
Tssr88397	9	21367393 to 21367402	9	-	TSS region	transcription start site region 88397
Gm36198	9	21367396 to 21369184	1788	-	antisense lncRNA gene	predicted gene, 36198
Tssr88398	9	21367423 to 21367442	19	-	TSS region	transcription start site region 88398
Tssr88399	9	21367452 to 21367472	20	-	TSS region	transcription start site region 88399
Tssr83989	9	21367865 to 21367881	16	+	TSS region	transcription start site region 83989
Ilf3	9	21367871 to 21405361	37490	+	protein coding gene	interleukin enhancer binding factor 3
Tssr83990	9	21367890 to 21367970	80	+	TSS region	transcription start site region 83990
Tssr83991	9	21368014 to 21368027	13	+	TSS region	transcription start site region 83991
Tssr83992	9	21368047 to 21368061	14	+	TSS region	transcription start site region 83992
Tssr83993	9	21368495 to 21368505	10	+	TSS region	transcription start site region 83993
Tssr83994	9	21368507 to 21368524	17	+	TSS region	transcription start site region 83994