Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:21086749-21186769

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm38431 9 21067514 to 21091997 24483 - lncRNA gene predicted gene, 38431
Raver1 9 21074158 to 21091988 17830 - protein coding gene ribonucleoprotein, PTB-binding 1
Cpgi21419 9 21091407 to 21092272 865 CpG island CpG island 21419
Tssr83965 9 21091728 to 21091767 39 + TSS region transcription start site region 83965
1700084C06Rik 9 21091755 to 21128393 36638 + antisense lncRNA gene RIKEN cDNA 1700084C06 gene
Tssr88366 9 21091974 to 21092007 33 - TSS region transcription start site region 88366
Tyk2 9 21104068 to 21131243 27175 - protein coding gene tyrosine kinase 2
Tssr88367 9 21121651 to 21121660 9 - TSS region transcription start site region 88367
D9Mit361 9 21128961 to 21129069 108 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology-361
Cpgi21420 9 21130964 to 21131610 646 CpG island CpG island 21420
Tssr88368 9 21131161 to 21131168 7 - TSS region transcription start site region 88368
Tssr88369 9 21131181 to 21131221 40 - TSS region transcription start site region 88369
Tssr88370 9 21131226 to 21131248 22 - TSS region transcription start site region 88370
Tssr88371 9 21131251 to 21131288 37 - TSS region transcription start site region 88371
Tssr83966 9 21131489 to 21131531 42 + TSS region transcription start site region 83966
Tssr83967 9 21136749 to 21136769 20 + TSS region transcription start site region 83967
Cdc37 9 21138541 to 21149977 11436 - protein coding gene cell division cycle 37
Tssr88372 9 21142050 to 21142068 18 - TSS region transcription start site region 88372
Tssr88373 9 21149564 to 21149568 4 - TSS region transcription start site region 88373
Cpgi21421 9 21149629 to 21150336 707 CpG island CpG island 21421
Tssr88374 9 21149873 to 21149887 14 - TSS region transcription start site region 88374
Tssr88375 9 21149894 to 21149978 84 - TSS region transcription start site region 88375
Gm35977 9 21149985 to 21157492 7507 + lncRNA gene predicted gene, 35977
Gm39301 9 21155383 to 21156010 627 + lncRNA gene predicted gene, 39301
D9Mit323 9 21156610 to 21156758 148 DNA segment DNA Segment, Chr 9 Massachusetts Institute of Technology 323
Gm36118 9 21160341 to 21165668 5327 - lncRNA gene predicted gene, 36118
Cpgi21422 9 21161156 to 21161879 723 CpG island CpG island 21422
Cpgi21423 9 21163955 to 21164570 615 CpG island CpG island 21423
Cpgi21424 9 21164656 to 21166822 2166 CpG island CpG island 21424
Pde4a 9 21165714 to 21213248 47534 + protein coding gene phosphodiesterase 4A, cAMP specific
Tssr83968 9 21165720 to 21165762 42 + TSS region transcription start site region 83968
Tssr88376 9 21166855 to 21166895 40 - TSS region transcription start site region 88376
Tssr83969 9 21167944 to 21167964 20 + TSS region transcription start site region 83969
Tssr88377 9 21168320 to 21168378 58 - TSS region transcription start site region 88377
Cpgi21425 9 21181367 to 21182025 658 CpG island CpG island 21425
Tssr83970 9 21181571 to 21181624 53 + TSS region transcription start site region 83970
Cpgi21426 9 21183986 to 21184510 524 CpG island CpG island 21426
Tssr83971 9 21184113 to 21184130 17 + TSS region transcription start site region 83971
Tssr83972 9 21184172 to 21184186 14 + TSS region transcription start site region 83972
Tssr83973 9 21184348 to 21184384 36 + TSS region transcription start site region 83973