Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:21041728-21141767

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zglp1 9 21062393 to 21067093 4700 - protein coding gene zinc finger, GATA-like protein 1
Gm49373 9 21062400 to 21073096 10696 - protein coding gene predicted gene, 49373
Cpgi21417 9 21066810 to 21067251 441 CpG island CpG island 21417
Gm38431 9 21067514 to 21091997 24483 - lncRNA gene predicted gene, 38431
Fdx2 9 21067520 to 21073514 5994 - protein coding gene ferredoxin 2
Cpgi21418 9 21072909 to 21073749 840 CpG island CpG island 21418
Tssr88356 9 21073215 to 21073239 24 - TSS region transcription start site region 88356
Tssr88357 9 21073494 to 21073541 47 - TSS region transcription start site region 88357
Raver1 9 21074158 to 21091988 17830 - protein coding gene ribonucleoprotein, PTB-binding 1
Tssr88358 9 21074877 to 21074921 44 - TSS region transcription start site region 88358
Tssr88359 9 21075241 to 21075264 23 - TSS region transcription start site region 88359
Tssr88360 9 21075280 to 21075303 23 - TSS region transcription start site region 88360
Mir7082 9 21075497 to 21075588 91 - miRNA gene microRNA 7082
Tssr88361 9 21077186 to 21077189 3 - TSS region transcription start site region 88361
Tssr88362 9 21078478 to 21078510 32 - TSS region transcription start site region 88362
Tssr88363 9 21078634 to 21078658 24 - TSS region transcription start site region 88363
Tssr88364 9 21079464 to 21079503 39 - TSS region transcription start site region 88364
Tssr83964 9 21079731 to 21079735 4 + TSS region transcription start site region 83964
Tssr88365 9 21079798 to 21079809 11 - TSS region transcription start site region 88365
Cpgi21419 9 21091407 to 21092272 865 CpG island CpG island 21419
Tssr83965 9 21091728 to 21091767 39 + TSS region transcription start site region 83965
1700084C06Rik 9 21091755 to 21128393 36638 + antisense lncRNA gene RIKEN cDNA 1700084C06 gene
Tssr88366 9 21091974 to 21092007 33 - TSS region transcription start site region 88366
Tyk2 9 21104068 to 21131243 27175 - protein coding gene tyrosine kinase 2
Tssr88367 9 21121651 to 21121660 9 - TSS region transcription start site region 88367
D9Mit361 9 21128961 to 21129069 108 DNA segment DNA Segment, Chr 9, Massachusetts Institute of Technology-361
Cpgi21420 9 21130964 to 21131610 646 CpG island CpG island 21420
Tssr88368 9 21131161 to 21131168 7 - TSS region transcription start site region 88368
Tssr88369 9 21131181 to 21131221 40 - TSS region transcription start site region 88369
Tssr88370 9 21131226 to 21131248 22 - TSS region transcription start site region 88370
Tssr88371 9 21131251 to 21131288 37 - TSS region transcription start site region 88371
Tssr83966 9 21131489 to 21131531 42 + TSS region transcription start site region 83966
Tssr83967 9 21136749 to 21136769 20 + TSS region transcription start site region 83967
Cdc37 9 21138541 to 21149977 11436 - protein coding gene cell division cycle 37