Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:20945952-20996793

15 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dnmt1	9	20907209 to 20959888	52679	-	protein coding gene	DNA methyltransferase (cytosine-5) 1
Cpgi21407	9	20952216 to 20953115	899		CpG island	CpG island 21407
Tssr88344	9	20952802 to 20952834	32	-	TSS region	transcription start site region 88344
Tssr88345	9	20952838 to 20952881	43	-	TSS region	transcription start site region 88345
Tssr2791	9	20953027 to 20953061	34	+	TSS region	transcription start site region 2791
Tssr88346	9	20959785 to 20959792	7	-	TSS region	transcription start site region 88346
S1pr2	9	20965952 to 20976793	10841	-	protein coding gene	sphingosine-1-phosphate receptor 2
Tssr83936	9	20972960 to 20972974	14	+	TSS region	transcription start site region 83936
Cpgi21408	9	20975401 to 20977079	1678		CpG island	CpG island 21408
Tssr83937	9	20975912 to 20975927	15	+	TSS region	transcription start site region 83937
Tssr88347	9	20976671 to 20976719	48	-	TSS region	transcription start site region 88347
Tssr88348	9	20976721 to 20976748	27	-	TSS region	transcription start site region 88348
Tssr88349	9	20976762 to 20976774	12	-	TSS region	transcription start site region 88349
Tssr88350	9	20979306 to 20979315	9	-	TSS region	transcription start site region 88350
Tssr83938	9	20983529 to 20983545	16	+	TSS region	transcription start site region 83938