Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:20312865-20642978

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45815 9 20313488 to 20313633 145 - pseudogene predicted gene 45815
Olfr18 9 20313892 to 20336094 22202 - protein coding gene olfactory receptor 18
Zfp560 9 20345136 to 20385158 40022 - protein coding gene zinc finger protein 560
Cpgi21386 9 20384904 to 20385594 690 CpG island CpG island 21386
Tssr88293 9 20385090 to 20385146 56 - TSS region transcription start site region 88293
4921534A09Rik 9 20385234 to 20387728 2494 + unclassified gene RIKEN cDNA 4921534A09 gene
Gm29761 9 20399922 to 20401860 1938 - pseudogene predicted gene, 29761
Gm48729 9 20413175 to 20413387 212 + pseudogene predicted gene, 48729
Zfp26 9 20428449 to 20460162 31713 - protein coding gene zinc finger protein 26
Tssr88294 9 20431245 to 20431249 4 - TSS region transcription start site region 88294
Gm26733 9 20432760 to 20563282 130522 + lincRNA gene predicted gene, 26733
Tssr88295 9 20450084 to 20450087 3 - TSS region transcription start site region 88295
Tssr88296 9 20451859 to 20451862 3 - TSS region transcription start site region 88296
Gm48738 9 20456783 to 20457171 388 - pseudogene predicted gene, 48738
Cpgi21387 9 20459559 to 20460083 524 CpG island CpG island 21387
Tssr88297 9 20459950 to 20460004 54 - TSS region transcription start site region 88297
Zfp426 9 20468549 to 20492746 24197 - protein coding gene zinc finger protein 426
Gm23316 9 20477865 to 20477978 113 + snRNA gene predicted gene, 23316
Tssr88298 9 20480837 to 20480856 19 - TSS region transcription start site region 88298
Tssr88299 9 20480866 to 20480888 22 - TSS region transcription start site region 88299
Tssr88300 9 20480905 to 20480919 14 - TSS region transcription start site region 88300
Tssr88301 9 20481721 to 20481755 34 - TSS region transcription start site region 88301
Cpgi21388 9 20492481 to 20492983 502 CpG island CpG island 21388
Tssr88302 9 20492691 to 20492710 19 - TSS region transcription start site region 88302
Tssr88303 9 20492723 to 20492765 42 - TSS region transcription start site region 88303
Tssr83899 9 20492757 to 20492800 43 + TSS region transcription start site region 83899
Zfp266 9 20495068 to 20521417 26349 - protein coding gene zinc finger protein 266
Tssr88304 9 20497873 to 20497879 6 - TSS region transcription start site region 88304
Tssr88305 9 20498339 to 20498368 29 - TSS region transcription start site region 88305
Cpgi21389 9 20521009 to 20521991 982 CpG island CpG island 21389
Tssr88306 9 20521360 to 20521371 11 - TSS region transcription start site region 88306
Tssr88307 9 20521375 to 20521427 52 - TSS region transcription start site region 88307
Tssr88308 9 20521548 to 20521629 81 - TSS region transcription start site region 88308
7030419G21Rik 9 20543369 to 20545428 2059 unclassified gene RIKEN cDNA 7030419G21 gene
Cpgi21390 9 20544179 to 20545065 886 CpG island CpG island 21390
Tssr83900 9 20544608 to 20544651 43 + TSS region transcription start site region 83900
Gm46142 9 20555329 to 20555769 440 + pseudogene predicted gene, 46142
Cpgi21391 9 20581159 to 20581740 581 CpG island CpG island 21391
Tssr88309 9 20581293 to 20581306 13 - TSS region transcription start site region 88309
Tssr83901 9 20581296 to 20581333 37 + TSS region transcription start site region 83901
Zfp846 9 20581328 to 20605404 24076 + protein coding gene zinc finger protein 846
Tssr83902 9 20581345 to 20581359 14 + TSS region transcription start site region 83902
Tssr83903 9 20581424 to 20581458 34 + TSS region transcription start site region 83903
Tssr83904 9 20581507 to 20581588 81 + TSS region transcription start site region 83904
D9Mit283.2 9 20605898 to 20606039 141 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 283.2
Gm48069 9 20606133 to 20607616 1483 - unclassified gene predicted gene, 48069
Cpgi21392 9 20607051 to 20607911 860 CpG island CpG island 21392
Fbxl12os 9 20607475 to 20617271 9796 + antisense lncRNA gene F-box and leucine-rich repeat protein 12, opposite strand
Gm26521 9 20607766 to 20612485 4719 - lincRNA gene predicted gene, 26521
Tssr88310 9 20636370 to 20636380 10 - TSS region transcription start site region 88310
Fbxl12 9 20637749 to 20644767 7018 - protein coding gene F-box and leucine-rich repeat protein 12
Tssr88311 9 20640397 to 20640401 4 - TSS region transcription start site region 88311
Cpgi21393 9 20641912 to 20643419 1507 CpG island CpG island 21393
Tssr2788 9 20642115 to 20642120 5 + TSS region transcription start site region 2788
Tssr88312 9 20642280 to 20642322 42 - TSS region transcription start site region 88312
Tssr88313 9 20642483 to 20642506 23 - TSS region transcription start site region 88313
Tssr88314 9 20642511 to 20642536 25 - TSS region transcription start site region 88314
Tssr88315 9 20642586 to 20642606 20 - TSS region transcription start site region 88315
Tssr88316 9 20642624 to 20642637 13 - TSS region transcription start site region 88316
Tssr83905 9 20642684 to 20642698 14 + TSS region transcription start site region 83905
Tssr83906 9 20642702 to 20642712 10 + TSS region transcription start site region 83906
Tssr83907 9 20642869 to 20642898 29 + TSS region transcription start site region 83907
Tssr83908 9 20642913 to 20642942 29 + TSS region transcription start site region 83908
Tssr83909 9 20642946 to 20642960 14 + TSS region transcription start site region 83909