Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:19902162-20595913

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfr77 9 19917229 to 19922510 5281 + protein coding gene olfactory receptor 77
Gm7808 9 19927896 to 19928282 386 - pseudogene predicted pseudogene 7808
Tssr88292 9 19928320 to 19928324 4 - TSS region transcription start site region 88292
Olfr863-ps1 9 19941510 to 19942438 928 - polymorphic pseudogene olfactory receptor 863, pseudogene 1
Olfr864-ps1 9 19996433 to 19997359 926 + pseudogene olfactory receptor 864, pseudogene 1
Olfr865-ps1 9 20024684 to 20024768 84 - pseudogene olfactory receptor 865, pseudogene 1
Olfr866 9 20026959 to 20028035 1076 - protein coding gene olfactory receptor 866
Gm44395 9 20030988 to 20031140 152 - miRNA gene predicted gene, 44395
Gm26231 9 20035154 to 20035220 66 + miRNA gene predicted gene, 26231
Olfr867 9 20054466 to 20055461 995 - protein coding gene olfactory receptor 867
Olfr868 9 20098626 to 20101690 3064 + protein coding gene olfactory receptor 868
Olfr869 9 20129009 to 20138763 9754 + protein coding gene olfactory receptor 869
Olfr870 9 20170634 to 20171569 935 - protein coding gene olfactory receptor 870
Gm25914 9 20173087 to 20173239 152 + snRNA gene predicted gene, 25914
Gm26290 9 20209207 to 20209351 144 - snRNA gene predicted gene, 26290
Olfr871 9 20212207 to 20213353 1146 + protein coding gene olfactory receptor 871
Olfr872 9 20237162 to 20260913 23751 + protein coding gene olfactory receptor 872
Gm25425 9 20252793 to 20252888 95 - snRNA gene predicted gene, 25425
Olfr39 9 20282351 to 20286648 4297 + protein coding gene olfactory receptor 39
Olfr873 9 20300211 to 20301170 959 + protein coding gene olfactory receptor 873
Gm45815 9 20313488 to 20313633 145 - pseudogene predicted gene 45815
Olfr18 9 20313892 to 20336094 22202 - protein coding gene olfactory receptor 18
Zfp560 9 20345136 to 20385158 40022 - protein coding gene zinc finger protein 560
Cpgi21386 9 20384904 to 20385594 690 CpG island CpG island 21386
Tssr88293 9 20385090 to 20385146 56 - TSS region transcription start site region 88293
4921534A09Rik 9 20385234 to 20387728 2494 + unclassified gene RIKEN cDNA 4921534A09 gene
Gm29761 9 20399922 to 20401860 1938 - pseudogene predicted gene, 29761
Gm48729 9 20413175 to 20413387 212 + pseudogene predicted gene, 48729
Zfp26 9 20428449 to 20460162 31713 - protein coding gene zinc finger protein 26
Tssr88294 9 20431245 to 20431249 4 - TSS region transcription start site region 88294
Gm26733 9 20432760 to 20563282 130522 + lincRNA gene predicted gene, 26733
Tssr88295 9 20450084 to 20450087 3 - TSS region transcription start site region 88295
Tssr88296 9 20451859 to 20451862 3 - TSS region transcription start site region 88296
Gm48738 9 20456783 to 20457171 388 - pseudogene predicted gene, 48738
Cpgi21387 9 20459559 to 20460083 524 CpG island CpG island 21387
Tssr88297 9 20459950 to 20460004 54 - TSS region transcription start site region 88297
Zfp426 9 20468549 to 20492746 24197 - protein coding gene zinc finger protein 426
Gm23316 9 20477865 to 20477978 113 + snRNA gene predicted gene, 23316
Tssr88298 9 20480837 to 20480856 19 - TSS region transcription start site region 88298
Tssr88299 9 20480866 to 20480888 22 - TSS region transcription start site region 88299
Tssr88300 9 20480905 to 20480919 14 - TSS region transcription start site region 88300
Tssr88301 9 20481721 to 20481755 34 - TSS region transcription start site region 88301
Cpgi21388 9 20492481 to 20492983 502 CpG island CpG island 21388
Tssr88302 9 20492691 to 20492710 19 - TSS region transcription start site region 88302
Tssr88303 9 20492723 to 20492765 42 - TSS region transcription start site region 88303
Tssr83899 9 20492757 to 20492800 43 + TSS region transcription start site region 83899
Zfp266 9 20495068 to 20521417 26349 - protein coding gene zinc finger protein 266
Tssr88304 9 20497873 to 20497879 6 - TSS region transcription start site region 88304
Tssr88305 9 20498339 to 20498368 29 - TSS region transcription start site region 88305
Cpgi21389 9 20521009 to 20521991 982 CpG island CpG island 21389
Tssr88306 9 20521360 to 20521371 11 - TSS region transcription start site region 88306
Tssr88307 9 20521375 to 20521427 52 - TSS region transcription start site region 88307
Tssr88308 9 20521548 to 20521629 81 - TSS region transcription start site region 88308
7030419G21Rik 9 20543369 to 20545428 2059 unclassified gene RIKEN cDNA 7030419G21 gene
Cpgi21390 9 20544179 to 20545065 886 CpG island CpG island 21390
Tssr83900 9 20544608 to 20544651 43 + TSS region transcription start site region 83900
Gm46142 9 20555329 to 20555769 440 + pseudogene predicted gene, 46142
Cpgi21391 9 20581159 to 20581740 581 CpG island CpG island 21391
Tssr88309 9 20581293 to 20581306 13 - TSS region transcription start site region 88309
Tssr83901 9 20581296 to 20581333 37 + TSS region transcription start site region 83901
Zfp846 9 20581328 to 20605404 24076 + protein coding gene zinc finger protein 846
Tssr83902 9 20581345 to 20581359 14 + TSS region transcription start site region 83902
Tssr83903 9 20581424 to 20581458 34 + TSS region transcription start site region 83903
Tssr83904 9 20581507 to 20581588 81 + TSS region transcription start site region 83904