Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:18330654-18546316

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Naalad2 9 18321954 to 18397354 75400 - protein coding gene N-acetylated alpha-linked acidic dipeptidase 2
Tssr88277 9 18385955 to 18385978 23 - TSS region transcription start site region 88277
Tssr88278 9 18385981 to 18386068 87 - TSS region transcription start site region 88278
Gm19174 9 18400542 to 18402855 2313 + pseudogene predicted gene, 19174
Ubtfl1 9 18404418 to 18411502 7084 + protein coding gene upstream binding transcription factor, RNA polymerase I-like 1
Gm5612 9 18427543 to 18427917 374 + pseudogene predicted gene 5612
Mbd3l2 9 18430654 to 18446316 15662 + protein coding gene methyl-CpG binding domain protein 3-like 2
Zfp558 9 18455575 to 18478268 22693 - protein coding gene zinc finger protein 558
Gm22854 9 18460210 to 18460293 83 - miRNA gene predicted gene, 22854
Tssr88279 9 18468026 to 18468043 17 - TSS region transcription start site region 88279
Tssr88280 9 18468192 to 18468203 11 - TSS region transcription start site region 88280
Tssr88281 9 18469655 to 18469679 24 - TSS region transcription start site region 88281
Tssr88282 9 18469682 to 18469700 18 - TSS region transcription start site region 88282
Tssr88283 9 18469703 to 18469712 9 - TSS region transcription start site region 88283
Cpgi21383 9 18473328 to 18473827 499 CpG island CpG island 21383
Tssr88284 9 18473567 to 18473582 15 - TSS region transcription start site region 88284
Tssr88285 9 18473611 to 18473682 71 - TSS region transcription start site region 88285
D9Mit187 9 18478102 to 18478232 130 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 187
Tssr88286 9 18478260 to 18478304 44 - TSS region transcription start site region 88286
D9Mit187.1 9 18478307 to 18478436 129 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 187.1
Tssr83887 9 18478337 to 18478344 7 + TSS region transcription start site region 83887
Tssr83888 9 18478347 to 18478350 3 + TSS region transcription start site region 83888
Tssr83889 9 18478359 to 18478361 2 + TSS region transcription start site region 83889
Mbd3l1 9 18478359 to 18485298 6939 + protein coding gene methyl-CpG binding domain protein 3-like 1
Tssr83890 9 18478363 to 18478377 14 + TSS region transcription start site region 83890
Tssr83891 9 18478382 to 18478401 19 + TSS region transcription start site region 83891
Muc16 9 18495455 to 18674530 179075 - protein coding gene mucin 16