Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 9:15509864-15677933

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21 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Smco4 9 15493432 to 15545260 51828 + protein coding gene single-pass membrane protein with coiled-coil domains 4
Tssr83868 9 15520830 to 15520834 4 + TSS region transcription start site region 83868
Gm51703 9 15527155 to 15538429 11274 - lincRNA gene predicted gene, 51703
Gm46152 9 15533616 to 15543578 9962 + lncRNA gene predicted gene, 46152
Tssr83869 9 15538776 to 15538823 47 + TSS region transcription start site region 83869
Deup1 9 15559864 to 15627933 68069 - protein coding gene deuterosome assembly protein 1
Gm39295 9 15614531 to 15615169 638 + lncRNA gene predicted gene, 39295
Tssr88247 9 15619606 to 15619615 9 - TSS region transcription start site region 88247
Tssr88248 9 15619616 to 15619627 11 - TSS region transcription start site region 88248
4930540M03Rik 9 15619857 to 15641220 21363 + lncRNA gene RIKEN cDNA 4930540M03 gene
Cpgi21372 9 15627721 to 15628220 499 CpG island CpG island 21372
Tssr88249 9 15627820 to 15627834 14 - TSS region transcription start site region 88249
Tssr88250 9 15627840 to 15627851 11 - TSS region transcription start site region 88250
Tssr88251 9 15627870 to 15627884 14 - TSS region transcription start site region 88251
Tssr88252 9 15627897 to 15627907 10 - TSS region transcription start site region 88252
Tssr88253 9 15627910 to 15627922 12 - TSS region transcription start site region 88253
Tssr83870 9 15627925 to 15627970 45 + TSS region transcription start site region 83870
Tssr88254 9 15628283 to 15628311 28 - TSS region transcription start site region 88254
Tssr88255 9 15628326 to 15628341 15 - TSS region transcription start site region 88255
Gm7642 9 15644283 to 15646091 1808 + pseudogene predicted gene 7642
Gm35225 9 15671211 to 15677564 6353 + lncRNA gene predicted gene, 35225