Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:15302267-15413125

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4931406C07Rik 9 15283337 to 15306448 23111 - protein coding gene RIKEN cDNA 4931406C07 gene
Cpgi21368 9 15305747 to 15306781 1034 CpG island CpG island 21368
Tssr88240 9 15306095 to 15306114 19 - TSS region transcription start site region 88240
Tssr88241 9 15306116 to 15306159 43 - TSS region transcription start site region 88241
Tssr83860 9 15306212 to 15306219 7 + TSS region transcription start site region 83860
Taf1d 9 15306214 to 15316991 10777 + protein coding gene TATA-box binding protein associated factor, RNA polymerase I, D
Tssr83861 9 15306221 to 15306240 19 + TSS region transcription start site region 83861
Tssr83862 9 15306252 to 15306268 16 + TSS region transcription start site region 83862
Tssr83863 9 15311163 to 15311167 4 + TSS region transcription start site region 83863
Gm25500 9 15312611 to 15312669 58 + snoRNA gene predicted gene, 25500
Mir7650 9 15312611 to 15312669 58 + miRNA gene microRNA 7650
Gm24455 9 15313802 to 15313932 130 + snoRNA gene predicted gene, 24455
Tssr83864 9 15313802 to 15313824 22 + TSS region transcription start site region 83864
Gm24299 9 15314074 to 15314144 70 + snoRNA gene predicted gene, 24299
Gm49349 9 15314842 to 15314908 66 + miRNA gene predicted gene, 49349
Gm25791 9 15314845 to 15314981 136 + snoRNA gene predicted gene, 25791
Gm22620 9 15315189 to 15315321 132 + snoRNA gene predicted gene, 22620
Tssr83865 9 15315520 to 15315536 16 + TSS region transcription start site region 83865
Gm24357 9 15315522 to 15315595 73 + snoRNA gene predicted gene, 24357
Gm23455 9 15316489 to 15316588 99 + snoRNA gene predicted gene, 23455
Gm22579 9 15316676 to 15316808 132 + snoRNA gene predicted gene, 22579
Cep295 9 15316915 to 15357788 40873 - protein coding gene centrosomal protein 295
Gm48142 9 15320733 to 15321277 544 + pseudogene predicted gene, 48142
Gm48141 9 15321605 to 15322316 711 + pseudogene predicted gene, 48141
Scarna9 9 15326289 to 15326330 41 - snoRNA gene small Cajal body-specific RNA 9
Gm24339 9 15326464 to 15326539 75 - snoRNA gene predicted gene, 24339
Tssr88242 9 15326535 to 15326559 24 - TSS region transcription start site region 88242
Gm16568 9 15330573 to 15335345 4772 + antisense lncRNA gene predicted gene 16568
Cpgi21370 9 15357267 to 15358125 858 CpG island CpG island 21370
Tssr88243 9 15357663 to 15357674 11 - TSS region transcription start site region 88243
Tssr88244 9 15357692 to 15357759 67 - TSS region transcription start site region 88244
Tssr88245 9 15357817 to 15357829 12 - TSS region transcription start site region 88245
Gm34973 9 15381367 to 15387425 6058 + lincRNA gene predicted gene, 34973
D9Mit1 9 15386545 to 15386653 108 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 1