MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 9:14946841-15217108

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm47214	9	14949463 to 14977583	28120	+	lincRNA gene	predicted gene, 47214
n-TKctt4	9	14958433 to 14958505	72	-	tRNA gene	nuclear encoded tRNA lysine 4 (anticodon CTT)
Panx1	9	15005785 to 15045478	39693	-	protein coding gene	pannexin 1
Tssr88223	9	15007836 to 15007871	35	-	TSS region	transcription start site region 88223
Tssr88224	9	15007894 to 15007901	7	-	TSS region	transcription start site region 88224
Cpgi21365	9	15044576 to 15045766	1190		CpG island	CpG island 21365
Tssr88225	9	15045106 to 15045135	29	-	TSS region	transcription start site region 88225
Tssr88226	9	15045145 to 15045156	11	-	TSS region	transcription start site region 88226
Tssr88227	9	15045378 to 15045502	124	-	TSS region	transcription start site region 88227
Tssr83856	9	15045581 to 15045593	12	+	TSS region	transcription start site region 83856
Hephl1	9	15051841 to 15112108	60267	-	protein coding gene	hephaestin-like 1
Tssr88228	9	15112100 to 15112119	19	-	TSS region	transcription start site region 88228
Tssr88229	9	15112145 to 15112157	12	-	TSS region	transcription start site region 88229
D9Mit220	9	15147858 to 15147976	118		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 220
Tssr83857	9	15207108 to 15207109	1	+	TSS region	transcription start site region 83857
Tssr83858	9	15208434 to 15208440	6	+	TSS region	transcription start site region 83858
Gm22658	9	15211631 to 15211785	154	-	snRNA gene	predicted gene, 22658
D9Dcr137	9	15215513 to 15215608	95		DNA segment	DNA Segment, Chr 9, Derry C. Roopenian 137