Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:14927145-15297157

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47214 9 14949463 to 14977583 28120 + lincRNA gene predicted gene, 47214
n-TKctt4 9 14958433 to 14958505 72 - tRNA gene nuclear encoded tRNA lysine 4 (anticodon CTT)
Panx1 9 15005785 to 15045478 39693 - protein coding gene pannexin 1
Tssr88223 9 15007836 to 15007871 35 - TSS region transcription start site region 88223
Tssr88224 9 15007894 to 15007901 7 - TSS region transcription start site region 88224
Cpgi21365 9 15044576 to 15045766 1190 CpG island CpG island 21365
Tssr88225 9 15045106 to 15045135 29 - TSS region transcription start site region 88225
Tssr88226 9 15045145 to 15045156 11 - TSS region transcription start site region 88226
Tssr88227 9 15045378 to 15045502 124 - TSS region transcription start site region 88227
Tssr83856 9 15045581 to 15045593 12 + TSS region transcription start site region 83856
Hephl1 9 15051841 to 15112108 60267 - protein coding gene hephaestin-like 1
Tssr88228 9 15112100 to 15112119 19 - TSS region transcription start site region 88228
Tssr88229 9 15112145 to 15112157 12 - TSS region transcription start site region 88229
D9Mit220 9 15147858 to 15147976 118 DNA segment DNA segment, Chr 9, Massachusetts Institute of Technology 220
Tssr83857 9 15207108 to 15207109 1 + TSS region transcription start site region 83857
Tssr83858 9 15208434 to 15208440 6 + TSS region transcription start site region 83858
Gm22658 9 15211631 to 15211785 154 - snRNA gene predicted gene, 22658
D9Dcr137 9 15215513 to 15215608 95 DNA segment DNA Segment, Chr 9, Derry C. Roopenian 137
Gm39293 9 15226918 to 15233358 6440 - lncRNA gene predicted gene, 39293
Cpgi21366 9 15238516 to 15239615 1099 CpG island CpG island 21366
Vstm5 9 15239045 to 15259416 20371 + protein coding gene V-set and transmembrane domain containing 5
Tssr83859 9 15239066 to 15239155 89 + TSS region transcription start site region 83859
Med17 9 15260351 to 15279931 19580 - protein coding gene mediator complex subunit 17
Tssr88230 9 15278789 to 15278793 4 - TSS region transcription start site region 88230
Tssr88231 9 15279361 to 15279366 5 - TSS region transcription start site region 88231
Cpgi21367 9 15279407 to 15280278 871 CpG island CpG island 21367
Tssr88232 9 15279847 to 15279856 9 - TSS region transcription start site region 88232
Tssr88233 9 15279860 to 15279877 17 - TSS region transcription start site region 88233
Tssr88234 9 15279888 to 15279919 31 - TSS region transcription start site region 88234
Tssr2786 9 15279922 to 15279927 5 - TSS region transcription start site region 2786
4931406C07Rik 9 15283337 to 15306448 23111 - protein coding gene RIKEN cDNA 4931406C07 gene
Tssr88235 9 15284643 to 15284658 15 - TSS region transcription start site region 88235
Tssr88236 9 15288048 to 15288081 33 - TSS region transcription start site region 88236