Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 9:14855785-15195478

42 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr83849	9	14858470 to 14858478	8	+	TSS region	transcription start site region 83849
Cpgi21364	9	14859802 to 14860865	1063		CpG island	CpG island 21364
Tssr88207	9	14860077 to 14860105	28	-	TSS region	transcription start site region 88207
Gpr83	9	14860210 to 14870789	10579	+	protein coding gene	G protein-coupled receptor 83
Tssr83850	9	14860232 to 14860246	14	+	TSS region	transcription start site region 83850
Izumo1r	9	14885814 to 14903949	18135	-	protein coding gene	IZUMO1 receptor, JUNO
Tssr83851	9	14900520 to 14900545	25	+	TSS region	transcription start site region 83851
Tssr88208	9	14900795 to 14900843	48	-	TSS region	transcription start site region 88208
Tssr88209	9	14901902 to 14901911	9	-	TSS region	transcription start site region 88209
Tssr88210	9	14902524 to 14902559	35	-	TSS region	transcription start site region 88210
Tssr88211	9	14902560 to 14902571	11	-	TSS region	transcription start site region 88211
Tssr83852	9	14902672 to 14902692	20	+	TSS region	transcription start site region 83852
Tssr88212	9	14903052 to 14903067	15	-	TSS region	transcription start site region 88212
Tssr83853	9	14903195 to 14903204	9	+	TSS region	transcription start site region 83853
Tssr83854	9	14903494 to 14903501	7	+	TSS region	transcription start site region 83854
Tssr83855	9	14903507 to 14903520	13	+	TSS region	transcription start site region 83855
Tssr88213	9	14903752 to 14903772	20	-	TSS region	transcription start site region 88213
Tssr2785	9	14903783 to 14903786	3	-	TSS region	transcription start site region 2785
Tssr88214	9	14903808 to 14903815	7	-	TSS region	transcription start site region 88214
Tssr88215	9	14903851 to 14903854	3	-	TSS region	transcription start site region 88215
Tssr88216	9	14903866 to 14903882	16	-	TSS region	transcription start site region 88216
Tssr88217	9	14903890 to 14903897	7	-	TSS region	transcription start site region 88217
Tssr88218	9	14903910 to 14903921	11	-	TSS region	transcription start site region 88218
Tssr88219	9	14903938 to 14903948	10	-	TSS region	transcription start site region 88219
Tssr88220	9	14903962 to 14903971	9	-	TSS region	transcription start site region 88220
Tssr88221	9	14903990 to 14904000	10	-	TSS region	transcription start site region 88221
Tssr88222	9	14904723 to 14904734	11	-	TSS region	transcription start site region 88222
Gm18789	9	14915472 to 14916021	549	-	pseudogene	predicted gene, 18789
Gm47214	9	14949463 to 14977583	28120	+	lincRNA gene	predicted gene, 47214
n-TKctt4	9	14958433 to 14958505	72	-	tRNA gene	nuclear encoded tRNA lysine 4 (anticodon CTT)
Panx1	9	15005785 to 15045478	39693	-	protein coding gene	pannexin 1
Tssr88223	9	15007836 to 15007871	35	-	TSS region	transcription start site region 88223
Tssr88224	9	15007894 to 15007901	7	-	TSS region	transcription start site region 88224
Cpgi21365	9	15044576 to 15045766	1190		CpG island	CpG island 21365
Tssr88225	9	15045106 to 15045135	29	-	TSS region	transcription start site region 88225
Tssr88226	9	15045145 to 15045156	11	-	TSS region	transcription start site region 88226
Tssr88227	9	15045378 to 15045502	124	-	TSS region	transcription start site region 88227
Tssr83856	9	15045581 to 15045593	12	+	TSS region	transcription start site region 83856
Hephl1	9	15051841 to 15112108	60267	-	protein coding gene	hephaestin-like 1
Tssr88228	9	15112100 to 15112119	19	-	TSS region	transcription start site region 88228
Tssr88229	9	15112145 to 15112157	12	-	TSS region	transcription start site region 88229
D9Mit220	9	15147858 to 15147976	118		DNA segment	DNA segment, Chr 9, Massachusetts Institute of Technology 220